Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 AC079140.4-201ENST00000507448 529 ntBASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA1Q9UND3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NPIPA1Q9UND3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPA1Q9UND3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.64■□□□□ 0.73
NPIPA1Q9UND3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.64■□□□□ 0.73
NPIPA1Q9UND3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NPIPA1Q9UND3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPA1Q9UND3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPA1Q9UND3 AC242852.2-201ENST00000615738 1807 ntBASIC19.64■□□□□ 0.73
NPIPA1Q9UND3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 AC087742.1-201ENST00000575880 1738 ntBASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 BID-214ENST00000617586 542 ntTSL 5 BASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NPIPA1Q9UND3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 HLA-L-209ENST00000420110 1011 ntBASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 AC073111.5-205ENST00000641717 521 ntBASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NPIPA1Q9UND3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 CDCA4P2-201ENST00000441182 718 ntBASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.61■□□□□ 0.73
NPIPA1Q9UND3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 EP400NL-214ENST00000641289 2402 ntBASIC19.6■□□□□ 0.73
NPIPA1Q9UND3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA1Q9UND3 LINC00526-201ENST00000581067 1875 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms