Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
RIMBP3Q9UFD9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
RIMBP3Q9UFD9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC34.64■■■■□ 3.14
RIMBP3Q9UFD9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC34.64■■■■□ 3.14
RIMBP3Q9UFD9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
RIMBP3Q9UFD9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
RIMBP3Q9UFD9 EEF1DP3-203ENST00000566025 782 ntBASIC34.64■■■■□ 3.14
RIMBP3Q9UFD9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
RIMBP3Q9UFD9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC34.64■■■■□ 3.14
RIMBP3Q9UFD9 LSM12P1-201ENST00000411836 588 ntBASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
RIMBP3Q9UFD9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 TPM4P1-201ENST00000436100 807 ntBASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
RIMBP3Q9UFD9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
RIMBP3Q9UFD9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
RIMBP3Q9UFD9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
RIMBP3Q9UFD9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC34.6■■■■□ 3.13
RIMBP3Q9UFD9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC34.6■■■■□ 3.13
RIMBP3Q9UFD9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
RIMBP3Q9UFD9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC34.6■■■■□ 3.13
RIMBP3Q9UFD9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC34.6■■■■□ 3.13
RIMBP3Q9UFD9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC34.6■■■■□ 3.13
RIMBP3Q9UFD9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC34.6■■■■□ 3.13
RIMBP3Q9UFD9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RIMBP3Q9UFD9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
RIMBP3Q9UFD9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC34.59■■■■□ 3.13
RIMBP3Q9UFD9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
RIMBP3Q9UFD9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC34.59■■■■□ 3.13
RIMBP3Q9UFD9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
RIMBP3Q9UFD9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC34.59■■■■□ 3.13
RIMBP3Q9UFD9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RIMBP3Q9UFD9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 SOX15-203ENST00000570788 1093 ntBASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
RIMBP3Q9UFD9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC34.57■■■■□ 3.13
RIMBP3Q9UFD9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC34.57■■■■□ 3.13
RIMBP3Q9UFD9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
RIMBP3Q9UFD9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
RIMBP3Q9UFD9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC34.57■■■■□ 3.12
RIMBP3Q9UFD9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC34.57■■■■□ 3.12
RIMBP3Q9UFD9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
RIMBP3Q9UFD9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
RIMBP3Q9UFD9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
RIMBP3Q9UFD9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC34.56■■■■□ 3.12
RIMBP3Q9UFD9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC34.56■■■■□ 3.12
RIMBP3Q9UFD9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
RIMBP3Q9UFD9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
RIMBP3Q9UFD9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC34.56■■■■□ 3.12
RIMBP3Q9UFD9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 FXN-202ENST00000396364 980 ntTSL 5 BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 SLC29A4P2-201ENST00000504749 1089 ntBASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC34.55■■■■□ 3.12
RIMBP3Q9UFD9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms