Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.54■■□□□ 1.04
NCKIPSDQ9NZQ3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 IKBKGP1-201ENST00000612193 1073 ntBASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 AC004687.1-201ENST00000579003 1625 ntBASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKIPSDQ9NZQ3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 AC068587.7-201ENST00000641602 218 ntBASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.52■■□□□ 1.04
NCKIPSDQ9NZQ3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NCKIPSDQ9NZQ3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.52■■□□□ 1.03
NCKIPSDQ9NZQ3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKIPSDQ9NZQ3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.5■■□□□ 1.03
NCKIPSDQ9NZQ3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NCKIPSDQ9NZQ3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCKIPSDQ9NZQ3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms