Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 KRT19P1-201ENST00000405746 1186 ntBASIC19.73■□□□□ 0.75
HPF1Q9NWY4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 AC139530.1-201ENST00000575312 1977 ntBASIC19.73■□□□□ 0.75
HPF1Q9NWY4 C1orf229-201ENST00000623686 2258 ntBASIC19.73■□□□□ 0.75
HPF1Q9NWY4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.73■□□□□ 0.75
HPF1Q9NWY4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 KRT87P-202ENST00000534226 1464 ntBASIC19.72■□□□□ 0.75
HPF1Q9NWY4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPF1Q9NWY4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPF1Q9NWY4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 AC055733.4-201ENST00000638462 1354 ntBASIC19.7■□□□□ 0.74
HPF1Q9NWY4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 AC016769.1-201ENST00000409132 1010 ntBASIC19.7■□□□□ 0.74
HPF1Q9NWY4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 AC137761.2-201ENST00000561729 223 ntBASIC19.7■□□□□ 0.74
HPF1Q9NWY4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 AC145350.3-201ENST00000569033 163 ntBASIC19.7■□□□□ 0.74
HPF1Q9NWY4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 KRT18P61-201ENST00000585825 1298 ntBASIC19.7■□□□□ 0.74
HPF1Q9NWY4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPF1Q9NWY4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HPF1Q9NWY4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 AC004911.1-201ENST00000416316 871 ntBASIC19.68■□□□□ 0.74
HPF1Q9NWY4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.68■□□□□ 0.74
HPF1Q9NWY4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms