Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 AC110285.6-201ENST00000617652 491 ntBASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZCCHC3Q9NUD5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 EDA-201ENST00000338901 1233 ntBASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 SMUG1P1-201ENST00000590640 811 ntBASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZCCHC3Q9NUD5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.02■□□□□ 0.79
ZCCHC3Q9NUD5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.02■□□□□ 0.79
ZCCHC3Q9NUD5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZCCHC3Q9NUD5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 AP001330.3-201ENST00000520123 633 ntBASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 Z98882.1-201ENST00000622160 2253 ntBASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZCCHC3Q9NUD5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZCCHC3Q9NUD5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 AL355001.2-201ENST00000620617 1191 ntBASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 TSPY26P-201ENST00000476365 1326 ntBASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ZCCHC3Q9NUD5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms