Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE1Q9NRR8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 AC104581.1-202ENST00000635932 2618 ntBASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 PKD1P5-201ENST00000532415 10291 ntBASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
CDC42SE1Q9NRR8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
CDC42SE1Q9NRR8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 AP000974.1-201ENST00000623909 2387 ntBASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 FEM1AP1-201ENST00000431297 1995 ntBASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CDC42SE1Q9NRR8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE1Q9NRR8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms