Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 AC024257.2-201ENST00000549699 147 ntBASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 AC233992.3-201ENST00000607491 485 ntBASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 AL136162.1-201ENST00000607711 1078 ntBASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 AC092666.2-201ENST00000613287 246 ntBASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NEUROD4Q9HD90 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.1■□□□□ 0.81
NEUROD4Q9HD90 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 PBX2P1-201ENST00000493219 1291 ntBASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 AC142381.2-201ENST00000566120 298 ntBASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NEUROD4Q9HD90 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NEUROD4Q9HD90 AL137060.1-201ENST00000618151 2648 ntBASIC20.08■□□□□ 0.81
NEUROD4Q9HD90 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.08■□□□□ 0.81
NEUROD4Q9HD90 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NEUROD4Q9HD90 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NEUROD4Q9HD90 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NEUROD4Q9HD90 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NEUROD4Q9HD90 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.08■□□□□ 0.81
NEUROD4Q9HD90 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.08■□□□□ 0.8
NEUROD4Q9HD90 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NEUROD4Q9HD90 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NEUROD4Q9HD90 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NEUROD4Q9HD90 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 IGHV3-19-201ENST00000521488 291 ntBASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 RARRES2P6-201ENST00000567333 442 ntBASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.07■□□□□ 0.8
NEUROD4Q9HD90 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 AC126544.1-201ENST00000580842 1059 ntBASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 AC106739.1-201ENST00000617035 715 ntBASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 AP006587.3-201ENST00000525742 1516 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms