Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 TSPY9P-201ENST00000440215 945 ntBASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 TSPY11P-201ENST00000442607 1045 ntBASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDC42EP4Q9H3Q1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CDC42EP4Q9H3Q1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDC42EP4Q9H3Q1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 AL049796.1-201ENST00000565336 1766 ntBASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 pRNA.6-201ENST00000610482 90 ntBASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 pRNA.5-201ENST00000612139 90 ntBASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 pRNA.11-201ENST00000618423 90 ntBASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 pRNA.13-201ENST00000619112 90 ntBASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42EP4Q9H3Q1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 FEM1AP1-201ENST00000431297 1995 ntBASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 AC092667.1-201ENST00000434301 2586 ntBASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42EP4Q9H3Q1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42EP4Q9H3Q1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.67■■□□□ 1.06
CDC42EP4Q9H3Q1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 AC239859.2-201ENST00000444165 318 ntBASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42EP4Q9H3Q1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 AC068587.7-201ENST00000641602 218 ntBASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms