Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC68Q9H2F9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC68Q9H2F9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC68Q9H2F9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.33■■□□□ 1
CCDC68Q9H2F9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC68Q9H2F9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
CCDC68Q9H2F9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC68Q9H2F9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC68Q9H2F9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.32■■□□□ 1
CCDC68Q9H2F9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.32■■□□□ 1
CCDC68Q9H2F9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.32■■□□□ 1
CCDC68Q9H2F9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.32■■□□□ 1
CCDC68Q9H2F9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC68Q9H2F9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC68Q9H2F9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC68Q9H2F9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CCDC68Q9H2F9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC68Q9H2F9 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.31■■□□□ 1
CCDC68Q9H2F9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC68Q9H2F9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC68Q9H2F9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC68Q9H2F9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC68Q9H2F9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC68Q9H2F9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.31■■□□□ 1
CCDC68Q9H2F9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.31■■□□□ 1
CCDC68Q9H2F9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.31■■□□□ 1
CCDC68Q9H2F9 AC008764.7-201ENST00000593779 1081 ntBASIC21.31■■□□□ 1
CCDC68Q9H2F9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC68Q9H2F9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC68Q9H2F9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.31■■□□□ 1
CCDC68Q9H2F9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC68Q9H2F9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC68Q9H2F9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.3■■□□□ 1
CCDC68Q9H2F9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.3■■□□□ 1
CCDC68Q9H2F9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC68Q9H2F9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.3■■□□□ 1
CCDC68Q9H2F9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.3■■□□□ 1
CCDC68Q9H2F9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.3■■□□□ 1
CCDC68Q9H2F9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.3■■□□□ 1
CCDC68Q9H2F9 AC106739.1-201ENST00000617035 715 ntBASIC21.3■■□□□ 1
CCDC68Q9H2F9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.3■■□□□ 1
CCDC68Q9H2F9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCDC68Q9H2F9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
CCDC68Q9H2F9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC68Q9H2F9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC68Q9H2F9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.29■■□□□ 1
CCDC68Q9H2F9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC68Q9H2F9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC68Q9H2F9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC68Q9H2F9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC68Q9H2F9 AP004607.7-201ENST00000527152 1677 ntBASIC21.29■■□□□ 1
CCDC68Q9H2F9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC68Q9H2F9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.29■■□□□ 1
CCDC68Q9H2F9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.29■■□□□ 1
CCDC68Q9H2F9 AC027682.1-201ENST00000562846 899 ntBASIC21.29■■□□□ 1
CCDC68Q9H2F9 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.29■■□□□ 1
CCDC68Q9H2F9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC68Q9H2F9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC68Q9H2F9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC68Q9H2F9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.29■■□□□ 1
CCDC68Q9H2F9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC68Q9H2F9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC68Q9H2F9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC68Q9H2F9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.28■■□□□ 1
CCDC68Q9H2F9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC68Q9H2F9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CCDC68Q9H2F9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC68Q9H2F9 EDA-201ENST00000338901 1233 ntBASIC21.28■■□□□ 1
CCDC68Q9H2F9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC68Q9H2F9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.28■■□□□ 1
CCDC68Q9H2F9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.28■■□□□ 1
CCDC68Q9H2F9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.28■■□□□ 1
CCDC68Q9H2F9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CCDC68Q9H2F9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.28■■□□□ 1
CCDC68Q9H2F9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC68Q9H2F9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC68Q9H2F9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC68Q9H2F9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC68Q9H2F9 AC099791.1-201ENST00000416440 715 ntBASIC21.27■■□□□ 1
CCDC68Q9H2F9 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.27■■□□□ 1
CCDC68Q9H2F9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 IGHV3-19-201ENST00000521488 291 ntBASIC21.27■■□□□ 1
CCDC68Q9H2F9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 AC104564.3-201ENST00000582367 638 ntBASIC21.27■■□□□ 1
CCDC68Q9H2F9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC68Q9H2F9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.27■■□□□ 1
CCDC68Q9H2F9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC68Q9H2F9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.27■□□□□ 0.99
CCDC68Q9H2F9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms