Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PCDHAC1Q9H158 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHAC1Q9H158 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCDHAC1Q9H158 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCDHAC1Q9H158 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHAC1Q9H158 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHAC1Q9H158 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHAC1Q9H158 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHAC1Q9H158 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHAC1Q9H158 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 AC104564.3-201ENST00000582367 638 ntBASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHAC1Q9H158 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 MIR4787-201ENST00000607364 84 ntBASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHAC1Q9H158 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 C17orf82-201ENST00000623772 1530 ntBASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 MTDHP2-201ENST00000601468 714 ntBASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHAC1Q9H158 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHAC1Q9H158 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 RARRES2P1-201ENST00000474487 481 ntBASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHAC1Q9H158 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms