Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO3Q9BXY4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO3Q9BXY4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RSPO3Q9BXY4 AC024257.2-201ENST00000549699 147 ntBASIC19.68■□□□□ 0.74
RSPO3Q9BXY4 SMUG1P1-201ENST00000590640 811 ntBASIC19.68■□□□□ 0.74
RSPO3Q9BXY4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO3Q9BXY4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RSPO3Q9BXY4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO3Q9BXY4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 AL157384.1-201ENST00000445995 2473 ntBASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO3Q9BXY4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RSPO3Q9BXY4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 BX842568.3-201ENST00000418104 571 ntBASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 AC104564.3-201ENST00000582367 638 ntBASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO3Q9BXY4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RSPO3Q9BXY4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RSPO3Q9BXY4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RSPO3Q9BXY4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms