Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA4Q9BXL8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.12■□□□□ 0.65
CDCA4Q9BXL8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA4Q9BXL8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA4Q9BXL8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CDCA4Q9BXL8 AP005212.1-201ENST00000581547 1997 ntBASIC19.12■□□□□ 0.65
CDCA4Q9BXL8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 AC103834.1-201ENST00000520383 144 ntBASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.11■□□□□ 0.65
CDCA4Q9BXL8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDCA4Q9BXL8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 AL031602.1-201ENST00000633169 911 ntBASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.09■□□□□ 0.65
CDCA4Q9BXL8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 OR7E47P-201ENST00000546390 1422 ntBASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 AC009102.2-201ENST00000606772 1639 ntBASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA4Q9BXL8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDCA4Q9BXL8 AL499627.2-201ENST00000606283 725 ntBASIC19.08■□□□□ 0.64
CDCA4Q9BXL8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDCA4Q9BXL8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.08■□□□□ 0.64
CDCA4Q9BXL8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.08■□□□□ 0.64
CDCA4Q9BXL8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA4Q9BXL8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA4Q9BXL8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CDCA4Q9BXL8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA4Q9BXL8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA4Q9BXL8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDCA4Q9BXL8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.06■□□□□ 0.64
CDCA4Q9BXL8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA4Q9BXL8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA4Q9BXL8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA4Q9BXL8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA4Q9BXL8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA4Q9BXL8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms