Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 AC010525.1-201ENST00000585559 441 ntBASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 AC144652.1-201ENST00000609974 1624 ntBASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRAF4Q9BUZ4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 AC027612.3-201ENST00000413684 1047 ntBASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF4Q9BUZ4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF4Q9BUZ4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAF4Q9BUZ4 LINC01529-204ENST00000636474 1715 ntBASIC18.97■□□□□ 0.63
TRAF4Q9BUZ4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAF4Q9BUZ4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF4Q9BUZ4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF4Q9BUZ4 AC012414.1-201ENST00000556676 535 ntBASIC18.97■□□□□ 0.63
TRAF4Q9BUZ4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRAF4Q9BUZ4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAF4Q9BUZ4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 AL354811.1-201ENST00000610286 706 ntBASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 AL031602.1-201ENST00000633169 911 ntBASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF4Q9BUZ4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 AC123595.1-201ENST00000440769 1046 ntBASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF4Q9BUZ4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 MIR6084-201ENST00000622012 110 ntBASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF4Q9BUZ4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF4Q9BUZ4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF4Q9BUZ4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF4Q9BUZ4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF4Q9BUZ4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRAF4Q9BUZ4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
TRAF4Q9BUZ4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms