Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
S1PR3Q99500 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.57■□□□□ 0.4
S1PR3Q99500 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
S1PR3Q99500 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.57■□□□□ 0.4
S1PR3Q99500 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
S1PR3Q99500 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
S1PR3Q99500 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
S1PR3Q99500 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
S1PR3Q99500 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.56■□□□□ 0.4
S1PR3Q99500 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
S1PR3Q99500 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
S1PR3Q99500 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
S1PR3Q99500 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
S1PR3Q99500 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.56■□□□□ 0.4
S1PR3Q99500 AL034346.1-201ENST00000568244 1277 ntBASIC17.56■□□□□ 0.4
S1PR3Q99500 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
S1PR3Q99500 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
S1PR3Q99500 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
S1PR3Q99500 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.56■□□□□ 0.4
S1PR3Q99500 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
S1PR3Q99500 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.56■□□□□ 0.4
S1PR3Q99500 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
S1PR3Q99500 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
S1PR3Q99500 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
S1PR3Q99500 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
S1PR3Q99500 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
S1PR3Q99500 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.55■□□□□ 0.4
S1PR3Q99500 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
S1PR3Q99500 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
S1PR3Q99500 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.55■□□□□ 0.4
S1PR3Q99500 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
S1PR3Q99500 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.55■□□□□ 0.4
S1PR3Q99500 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.55■□□□□ 0.4
S1PR3Q99500 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
S1PR3Q99500 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
S1PR3Q99500 AC244015.2-201ENST00000616358 1861 ntBASIC17.54■□□□□ 0.4
S1PR3Q99500 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.54■□□□□ 0.4
S1PR3Q99500 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.54■□□□□ 0.4
S1PR3Q99500 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.54■□□□□ 0.4
S1PR3Q99500 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.54■□□□□ 0.4
S1PR3Q99500 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.54■□□□□ 0.4
S1PR3Q99500 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.54■□□□□ 0.4
S1PR3Q99500 AL137060.1-201ENST00000618151 2648 ntBASIC17.54■□□□□ 0.4
S1PR3Q99500 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
S1PR3Q99500 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
S1PR3Q99500 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.53■□□□□ 0.4
S1PR3Q99500 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
S1PR3Q99500 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
S1PR3Q99500 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
S1PR3Q99500 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.53■□□□□ 0.4
S1PR3Q99500 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
S1PR3Q99500 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.53■□□□□ 0.4
S1PR3Q99500 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
S1PR3Q99500 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
S1PR3Q99500 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
S1PR3Q99500 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
S1PR3Q99500 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.52■□□□□ 0.4
S1PR3Q99500 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
S1PR3Q99500 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.52■□□□□ 0.4
S1PR3Q99500 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
S1PR3Q99500 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
S1PR3Q99500 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
S1PR3Q99500 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
S1PR3Q99500 EDA-201ENST00000338901 1233 ntBASIC17.52■□□□□ 0.4
S1PR3Q99500 BX842568.3-201ENST00000418104 571 ntBASIC17.52■□□□□ 0.4
S1PR3Q99500 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
S1PR3Q99500 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.52■□□□□ 0.4
S1PR3Q99500 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.52■□□□□ 0.4
S1PR3Q99500 AC133561.4-201ENST00000566112 224 ntBASIC17.52■□□□□ 0.4
S1PR3Q99500 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
S1PR3Q99500 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
S1PR3Q99500 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
S1PR3Q99500 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.52■□□□□ 0.39
S1PR3Q99500 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.52■□□□□ 0.39
S1PR3Q99500 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
S1PR3Q99500 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
S1PR3Q99500 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.51■□□□□ 0.39
S1PR3Q99500 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.51■□□□□ 0.39
S1PR3Q99500 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
S1PR3Q99500 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
S1PR3Q99500 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
S1PR3Q99500 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.51■□□□□ 0.39
S1PR3Q99500 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.51■□□□□ 0.39
S1PR3Q99500 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
S1PR3Q99500 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
S1PR3Q99500 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.51■□□□□ 0.39
S1PR3Q99500 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
S1PR3Q99500 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
S1PR3Q99500 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
S1PR3Q99500 AC104564.3-201ENST00000582367 638 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms