Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB40CQ96S21 AC137630.3-201ENST00000607245 391 ntBASIC17.26■□□□□ 0.35
RAB40CQ96S21 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40CQ96S21 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40CQ96S21 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RAB40CQ96S21 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB40CQ96S21 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40CQ96S21 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAB40CQ96S21 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.25■□□□□ 0.35
RAB40CQ96S21 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.25■□□□□ 0.35
RAB40CQ96S21 AC079089.2-201ENST00000531211 1277 ntBASIC17.25■□□□□ 0.35
RAB40CQ96S21 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.25■□□□□ 0.35
RAB40CQ96S21 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40CQ96S21 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40CQ96S21 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40CQ96S21 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB40CQ96S21 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40CQ96S21 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB40CQ96S21 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40CQ96S21 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40CQ96S21 AC103724.3-201ENST00000564481 992 ntBASIC17.24■□□□□ 0.35
RAB40CQ96S21 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RAB40CQ96S21 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB40CQ96S21 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 FEM1AP1-201ENST00000431297 1995 ntBASIC17.24■□□□□ 0.35
RAB40CQ96S21 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RAB40CQ96S21 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40CQ96S21 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40CQ96S21 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40CQ96S21 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40CQ96S21 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40CQ96S21 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40CQ96S21 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40CQ96S21 AC009102.2-201ENST00000606772 1639 ntBASIC17.23■□□□□ 0.35
RAB40CQ96S21 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40CQ96S21 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40CQ96S21 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40CQ96S21 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40CQ96S21 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB40CQ96S21 OR7E47P-201ENST00000546390 1422 ntBASIC17.22■□□□□ 0.35
RAB40CQ96S21 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40CQ96S21 AC026471.6-201ENST00000622954 1905 ntBASIC17.22■□□□□ 0.35
RAB40CQ96S21 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40CQ96S21 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40CQ96S21 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB40CQ96S21 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB40CQ96S21 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB40CQ96S21 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40CQ96S21 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40CQ96S21 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB40CQ96S21 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB40CQ96S21 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB40CQ96S21 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB40CQ96S21 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB40CQ96S21 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RAB40CQ96S21 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RAB40CQ96S21 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB40CQ96S21 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB40CQ96S21 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms