Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 LINC00565-201ENST00000562710 2331 ntBASIC17.78■□□□□ 0.44
GAFA1Q96PS6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 AC003102.1-202ENST00000563394 1796 ntBASIC17.77■□□□□ 0.44
GAFA1Q96PS6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GAFA1Q96PS6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GAFA1Q96PS6 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.77■□□□□ 0.43
GAFA1Q96PS6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GAFA1Q96PS6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GAFA1Q96PS6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GAFA1Q96PS6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GAFA1Q96PS6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
GAFA1Q96PS6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.77■□□□□ 0.43
GAFA1Q96PS6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.77■□□□□ 0.43
GAFA1Q96PS6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
GAFA1Q96PS6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 CCDC92B-201ENST00000575506 885 ntBASIC17.76■□□□□ 0.43
GAFA1Q96PS6 TERF1P2-201ENST00000583350 1212 ntBASIC17.76■□□□□ 0.43
GAFA1Q96PS6 FBXW4P1-201ENST00000426721 2239 ntBASIC17.76■□□□□ 0.43
GAFA1Q96PS6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAFA1Q96PS6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAFA1Q96PS6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 AC097381.1-201ENST00000429019 1296 ntBASIC17.74■□□□□ 0.43
GAFA1Q96PS6 AC079140.4-201ENST00000507448 529 ntBASIC17.74■□□□□ 0.43
GAFA1Q96PS6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 KRT18P14-201ENST00000534205 1250 ntBASIC17.74■□□□□ 0.43
GAFA1Q96PS6 AC104564.3-201ENST00000582367 638 ntBASIC17.74■□□□□ 0.43
GAFA1Q96PS6 MIR6821-201ENST00000617625 74 ntBASIC17.74■□□□□ 0.43
GAFA1Q96PS6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms