Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NECTIN4Q96NY8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 AL158047.1-201ENST00000445918 881 ntBASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 RPS2P4-201ENST00000476944 856 ntBASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NECTIN4Q96NY8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 AC128676.1-201ENST00000454392 318 ntBASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
NECTIN4Q96NY8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 POU5F1P4-201ENST00000413175 1085 ntBASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 AP006587.3-201ENST00000525742 1516 ntBASIC22.21■■□□□ 1.15
NECTIN4Q96NY8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
NECTIN4Q96NY8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.2■■□□□ 1.15
NECTIN4Q96NY8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.2■■□□□ 1.14
NECTIN4Q96NY8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 AL591742.1-201ENST00000604433 565 ntBASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 AC010980.2-201ENST00000587099 1412 ntBASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NECTIN4Q96NY8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.18■■□□□ 1.14
NECTIN4Q96NY8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NECTIN4Q96NY8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.18■■□□□ 1.14
NECTIN4Q96NY8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
NECTIN4Q96NY8 AL596275.1-201ENST00000423464 877 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms