Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTP4A1Q93096 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.15■□□□□ 0.66
PTP4A1Q93096 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.15■□□□□ 0.66
PTP4A1Q93096 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.15■□□□□ 0.66
PTP4A1Q93096 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PTP4A1Q93096 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.15■□□□□ 0.66
PTP4A1Q93096 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTP4A1Q93096 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.15■□□□□ 0.66
PTP4A1Q93096 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.15■□□□□ 0.66
PTP4A1Q93096 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PTP4A1Q93096 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A1Q93096 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A1Q93096 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A1Q93096 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.14■□□□□ 0.65
PTP4A1Q93096 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.14■□□□□ 0.65
PTP4A1Q93096 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A1Q93096 AC010141.3-201ENST00000456659 717 ntBASIC19.14■□□□□ 0.65
PTP4A1Q93096 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A1Q93096 AC008406.3-201ENST00000620001 1374 ntBASIC19.14■□□□□ 0.65
PTP4A1Q93096 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.14■□□□□ 0.65
PTP4A1Q93096 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTP4A1Q93096 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A1Q93096 DUX4L19-201ENST00000557448 1267 ntBASIC19.13■□□□□ 0.65
PTP4A1Q93096 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.13■□□□□ 0.65
PTP4A1Q93096 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.13■□□□□ 0.65
PTP4A1Q93096 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.13■□□□□ 0.65
PTP4A1Q93096 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
PTP4A1Q93096 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.13■□□□□ 0.65
PTP4A1Q93096 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A1Q93096 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTP4A1Q93096 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A1Q93096 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PTP4A1Q93096 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.12■□□□□ 0.65
PTP4A1Q93096 OXCT2P1-201ENST00000447263 1535 ntBASIC19.12■□□□□ 0.65
PTP4A1Q93096 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A1Q93096 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A1Q93096 AL136116.3-201ENST00000402907 1138 ntBASIC19.12■□□□□ 0.65
PTP4A1Q93096 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A1Q93096 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PTP4A1Q93096 AC010525.1-201ENST00000585559 441 ntBASIC19.12■□□□□ 0.65
PTP4A1Q93096 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.12■□□□□ 0.65
PTP4A1Q93096 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A1Q93096 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTP4A1Q93096 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A1Q93096 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A1Q93096 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A1Q93096 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A1Q93096 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.11■□□□□ 0.65
PTP4A1Q93096 AC073130.3-201ENST00000624389 2278 ntBASIC19.11■□□□□ 0.65
PTP4A1Q93096 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PTP4A1Q93096 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A1Q93096 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A1Q93096 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A1Q93096 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A1Q93096 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PTP4A1Q93096 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTP4A1Q93096 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTP4A1Q93096 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTP4A1Q93096 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTP4A1Q93096 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTP4A1Q93096 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTP4A1Q93096 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTP4A1Q93096 AC087239.1-201ENST00000622671 572 ntBASIC19.1■□□□□ 0.65
PTP4A1Q93096 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PTP4A1Q93096 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.1■□□□□ 0.65
PTP4A1Q93096 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.1■□□□□ 0.65
PTP4A1Q93096 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTP4A1Q93096 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTP4A1Q93096 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTP4A1Q93096 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 PKD1P6-201ENST00000343738 4769 ntBASIC19.09■□□□□ 0.65
PTP4A1Q93096 AL157384.1-201ENST00000445995 2473 ntBASIC19.09■□□□□ 0.65
PTP4A1Q93096 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTP4A1Q93096 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTP4A1Q93096 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTP4A1Q93096 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.09■□□□□ 0.65
PTP4A1Q93096 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTP4A1Q93096 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTP4A1Q93096 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTP4A1Q93096 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTP4A1Q93096 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms