Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.85■□□□□ 0.61
USP9XQ93008 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP9XQ93008 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP9XQ93008 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.85■□□□□ 0.61
USP9XQ93008 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.85■□□□□ 0.61
USP9XQ93008 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
USP9XQ93008 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
USP9XQ93008 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP9XQ93008 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP9XQ93008 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.84■□□□□ 0.61
USP9XQ93008 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.84■□□□□ 0.61
USP9XQ93008 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
USP9XQ93008 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.84■□□□□ 0.61
USP9XQ93008 AL353803.4-201ENST00000565882 1934 ntBASIC18.84■□□□□ 0.61
USP9XQ93008 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USP9XQ93008 AC233263.1-201ENST00000578059 224 ntBASIC18.84■□□□□ 0.61
USP9XQ93008 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP9XQ93008 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
USP9XQ93008 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP9XQ93008 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP9XQ93008 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP9XQ93008 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP9XQ93008 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.83■□□□□ 0.6
USP9XQ93008 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP9XQ93008 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP9XQ93008 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP9XQ93008 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.83■□□□□ 0.6
USP9XQ93008 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
USP9XQ93008 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP9XQ93008 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP9XQ93008 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.83■□□□□ 0.6
USP9XQ93008 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP9XQ93008 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.83■□□□□ 0.6
USP9XQ93008 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.83■□□□□ 0.6
USP9XQ93008 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.83■□□□□ 0.6
USP9XQ93008 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.82■□□□□ 0.6
USP9XQ93008 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP9XQ93008 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.82■□□□□ 0.6
USP9XQ93008 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP9XQ93008 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP9XQ93008 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP9XQ93008 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP9XQ93008 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.82■□□□□ 0.6
USP9XQ93008 AC012306.2-201ENST00000609350 630 ntBASIC18.82■□□□□ 0.6
USP9XQ93008 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP9XQ93008 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP9XQ93008 DUSP8P3-201ENST00000399571 1760 ntBASIC18.82■□□□□ 0.6
USP9XQ93008 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.82■□□□□ 0.6
USP9XQ93008 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP9XQ93008 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.82■□□□□ 0.6
USP9XQ93008 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.82■□□□□ 0.6
USP9XQ93008 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
USP9XQ93008 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.81■□□□□ 0.6
USP9XQ93008 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.81■□□□□ 0.6
USP9XQ93008 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP9XQ93008 C1QBPP2-201ENST00000528754 825 ntBASIC18.81■□□□□ 0.6
USP9XQ93008 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.81■□□□□ 0.6
USP9XQ93008 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.81■□□□□ 0.6
USP9XQ93008 CYP2T3P-201ENST00000601990 817 ntBASIC18.81■□□□□ 0.6
USP9XQ93008 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP9XQ93008 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP9XQ93008 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP9XQ93008 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.8■□□□□ 0.6
USP9XQ93008 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP9XQ93008 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.8■□□□□ 0.6
USP9XQ93008 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.8■□□□□ 0.6
USP9XQ93008 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP9XQ93008 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.8■□□□□ 0.6
USP9XQ93008 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP9XQ93008 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP9XQ93008 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP9XQ93008 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP9XQ93008 RN7SL850P-201ENST00000579959 291 ntBASIC18.8■□□□□ 0.6
USP9XQ93008 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP9XQ93008 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
USP9XQ93008 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP9XQ93008 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.79■□□□□ 0.6
USP9XQ93008 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP9XQ93008 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP9XQ93008 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP9XQ93008 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.79■□□□□ 0.6
USP9XQ93008 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
USP9XQ93008 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP9XQ93008 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
USP9XQ93008 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.79■□□□□ 0.6
USP9XQ93008 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP9XQ93008 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP9XQ93008 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP9XQ93008 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms