Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 LINC01003-201ENST00000564834 1764 ntBASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 AC091076.1-201ENST00000610741 619 ntBASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 AC113410.3-201ENST00000623366 203 ntBASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 SLC25A3P1-201ENST00000443844 931 ntBASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 AL023875.1-201ENST00000640777 796 ntBASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 RARRES2P10-201ENST00000564312 460 ntBASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
SYNE2Q8WXH0 AP001160.3-201ENST00000601484 763 ntBASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 LSM12P1-201ENST00000411836 588 ntBASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 AL845331.1-201ENST00000424978 1190 ntBASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 GXYLT1P4-201ENST00000613576 1192 ntBASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SYNE2Q8WXH0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -1
SYNE2Q8WXH0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -1
SYNE2Q8WXH0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC8.84□□□□□ -1
SYNE2Q8WXH0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC8.84□□□□□ -1
SYNE2Q8WXH0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 OXCT2P1-201ENST00000447263 1535 ntBASIC8.83□□□□□ -1
SYNE2Q8WXH0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 HCG4P8-203ENST00000443049 980 ntBASIC8.83□□□□□ -1
SYNE2Q8WXH0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms