Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CYP2T1P-201ENST00000432607 1285 ntBASIC21.46■■□□□ 1.03
HMGB4Q8WW32 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HMGB4Q8WW32 AC053503.5-201ENST00000601508 636 ntBASIC21.46■■□□□ 1.03
HMGB4Q8WW32 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HMGB4Q8WW32 AC066615.1-201ENST00000640911 628 ntBASIC21.46■■□□□ 1.03
HMGB4Q8WW32 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.46■■□□□ 1.03
HMGB4Q8WW32 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.46■■□□□ 1.03
HMGB4Q8WW32 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGB4Q8WW32 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.45■■□□□ 1.02
HMGB4Q8WW32 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.45■■□□□ 1.02
HMGB4Q8WW32 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.45■■□□□ 1.02
HMGB4Q8WW32 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.45■■□□□ 1.02
HMGB4Q8WW32 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
HMGB4Q8WW32 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGB4Q8WW32 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGB4Q8WW32 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.45■■□□□ 1.02
HMGB4Q8WW32 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 AC073210.2-201ENST00000430369 194 ntBASIC21.44■■□□□ 1.02
HMGB4Q8WW32 SLC7A5P1-201ENST00000568957 537 ntBASIC21.44■■□□□ 1.02
HMGB4Q8WW32 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGB4Q8WW32 AC068338.2-201ENST00000563278 1430 ntBASIC21.44■■□□□ 1.02
HMGB4Q8WW32 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGB4Q8WW32 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGB4Q8WW32 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGB4Q8WW32 MKRN4P-201ENST00000444706 1521 ntBASIC21.42■■□□□ 1.02
HMGB4Q8WW32 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HMGB4Q8WW32 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.42■■□□□ 1.02
HMGB4Q8WW32 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGB4Q8WW32 MIR4758-201ENST00000577688 71 ntBASIC21.42■■□□□ 1.02
HMGB4Q8WW32 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGB4Q8WW32 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.42■■□□□ 1.02
HMGB4Q8WW32 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.42■■□□□ 1.02
HMGB4Q8WW32 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.41■■□□□ 1.02
HMGB4Q8WW32 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 MIPEPP3-201ENST00000412105 444 ntBASIC21.4■■□□□ 1.02
HMGB4Q8WW32 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 AC120498.10-201ENST00000621827 505 ntBASIC21.4■■□□□ 1.02
HMGB4Q8WW32 AC008694.1-202ENST00000636953 945 ntBASIC21.4■■□□□ 1.02
HMGB4Q8WW32 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGB4Q8WW32 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGB4Q8WW32 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGB4Q8WW32 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
HMGB4Q8WW32 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB4Q8WW32 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB4Q8WW32 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
HMGB4Q8WW32 RNA5SP413-201ENST00000516373 109 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms