Protein–RNA interactions for Protein: Q8WUS8

SDR42E1, Short-chain dehydrogenase/reductase family 42E member 1, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1Q8WUS8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SDR42E1Q8WUS8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.47■■□□□ 1.67
SDR42E1Q8WUS8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SDR42E1Q8WUS8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
SDR42E1Q8WUS8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SDR42E1Q8WUS8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SDR42E1Q8WUS8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SDR42E1Q8WUS8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
SDR42E1Q8WUS8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SDR42E1Q8WUS8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 AP001160.3-201ENST00000601484 763 ntBASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 AC080038.1-201ENST00000611274 1154 ntBASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 GUSBP5-202ENST00000510805 1989 ntBASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SDR42E1Q8WUS8 AC133561.1-201ENST00000568600 2415 ntBASIC25.44■■□□□ 1.66
SDR42E1Q8WUS8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.44■■□□□ 1.66
SDR42E1Q8WUS8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SDR42E1Q8WUS8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SDR42E1Q8WUS8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SDR42E1Q8WUS8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SDR42E1Q8WUS8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SDR42E1Q8WUS8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SDR42E1Q8WUS8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SDR42E1Q8WUS8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 EEF1DP3-203ENST00000566025 782 ntBASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 UBE2DNL-204ENST00000602536 740 ntBASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 AC003102.1-202ENST00000563394 1796 ntBASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SDR42E1Q8WUS8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 AC011767.1-201ENST00000617410 1153 ntBASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 BID-214ENST00000617586 542 ntTSL 5 BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SDR42E1Q8WUS8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SDR42E1Q8WUS8 CDCA4P2-201ENST00000441182 718 ntBASIC25.41■■□□□ 1.66
SDR42E1Q8WUS8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.41■■□□□ 1.66
SDR42E1Q8WUS8 AC138907.5-202ENST00000569484 235 ntBASIC25.41■■□□□ 1.66
SDR42E1Q8WUS8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.41■■□□□ 1.66
SDR42E1Q8WUS8 AC073111.5-205ENST00000641717 521 ntBASIC25.41■■□□□ 1.66
SDR42E1Q8WUS8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 AC010141.2-201ENST00000452426 721 ntBASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 FAM99A-202ENST00000538190 1989 ntBASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SDR42E1Q8WUS8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
SDR42E1Q8WUS8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.39■■□□□ 1.66
SDR42E1Q8WUS8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
SDR42E1Q8WUS8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SDR42E1Q8WUS8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.39■■□□□ 1.66
SDR42E1Q8WUS8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms