Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 OXCT2P1-201ENST00000447263 1535 ntBASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 PCDHAC2-203ENST00000615316 3011 ntBASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 BHLHE23-202ENST00000612929 1109 ntBASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH3Q8TBE1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 NTF6A-201ENST00000591175 560 ntBASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 C17orf82-201ENST00000623772 1530 ntBASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.45■□□□□ 0.7
CNIH3Q8TBE1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 AL049796.1-201ENST00000565336 1766 ntBASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CNIH3Q8TBE1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNIH3Q8TBE1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 AFG3L1P-217ENST00000557444 2447 ntBASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CNIH3Q8TBE1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.41■□□□□ 0.7
CNIH3Q8TBE1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNIH3Q8TBE1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNIH3Q8TBE1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.41■□□□□ 0.7
CNIH3Q8TBE1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNIH3Q8TBE1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNIH3Q8TBE1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CNIH3Q8TBE1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNIH3Q8TBE1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNIH3Q8TBE1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms