Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 AC026271.2-201ENST00000428091 497 ntBASIC22.62■■□□□ 1.21
UBA3Q8TBC4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
UBA3Q8TBC4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.61■■□□□ 1.21
UBA3Q8TBC4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBA3Q8TBC4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
UBA3Q8TBC4 AC097381.1-201ENST00000429019 1296 ntBASIC22.61■■□□□ 1.21
UBA3Q8TBC4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
UBA3Q8TBC4 RARRES2P6-201ENST00000567333 442 ntBASIC22.61■■□□□ 1.21
UBA3Q8TBC4 CCDC92B-201ENST00000575506 885 ntBASIC22.61■■□□□ 1.21
UBA3Q8TBC4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBA3Q8TBC4 AC087623.3-201ENST00000607047 1098 ntBASIC22.61■■□□□ 1.21
UBA3Q8TBC4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBA3Q8TBC4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBA3Q8TBC4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBA3Q8TBC4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBA3Q8TBC4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 FBXW4P1-201ENST00000426721 2239 ntBASIC22.6■■□□□ 1.21
UBA3Q8TBC4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 MIR6821-201ENST00000617625 74 ntBASIC22.6■■□□□ 1.21
UBA3Q8TBC4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 AC003102.1-202ENST00000563394 1796 ntBASIC22.6■■□□□ 1.21
UBA3Q8TBC4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBA3Q8TBC4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 TERF1P2-201ENST00000583350 1212 ntBASIC22.59■■□□□ 1.21
UBA3Q8TBC4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBA3Q8TBC4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 KRT18P14-201ENST00000534205 1250 ntBASIC22.58■■□□□ 1.21
UBA3Q8TBC4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UBA3Q8TBC4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
UBA3Q8TBC4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.58■■□□□ 1.2
UBA3Q8TBC4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBA3Q8TBC4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBA3Q8TBC4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
UBA3Q8TBC4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.56■■□□□ 1.2
UBA3Q8TBC4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
UBA3Q8TBC4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
UBA3Q8TBC4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.56■■□□□ 1.2
UBA3Q8TBC4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms