Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 AC091874.3-201ENST00000512672 1195 ntBASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNIP1Q8TAD8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 DUSP8P5-201ENST00000422884 1815 ntBASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.16■□□□□ 0.82
SNIP1Q8TAD8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.15■□□□□ 0.82
SNIP1Q8TAD8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SNIP1Q8TAD8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 AC026366.1-201ENST00000488803 879 ntBASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 AC008550.1-201ENST00000511500 884 ntBASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SNIP1Q8TAD8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 AC142381.3-201ENST00000568208 1670 ntBASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.13■□□□□ 0.81
SNIP1Q8TAD8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 AC138932.3-201ENST00000567634 1902 ntBASIC20.12■□□□□ 0.81
SNIP1Q8TAD8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms