Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SMRP1Q8NCR6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SMRP1Q8NCR6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.28■■□□□ 1.16
SMRP1Q8NCR6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMRP1Q8NCR6 AC120498.10-201ENST00000621827 505 ntBASIC22.28■■□□□ 1.16
SMRP1Q8NCR6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMRP1Q8NCR6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SMRP1Q8NCR6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMRP1Q8NCR6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SMRP1Q8NCR6 AP006587.3-201ENST00000525742 1516 ntBASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 UBE2SP1-201ENST00000450587 669 ntBASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 AL591742.1-201ENST00000604433 565 ntBASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMRP1Q8NCR6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 LINC01124-201ENST00000409786 2117 ntBASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 LINC01960-201ENST00000563759 1884 ntBASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.25■■□□□ 1.15
SMRP1Q8NCR6 OR7E47P-201ENST00000546390 1422 ntBASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 AC008175.2-201ENST00000612840 297 ntBASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMRP1Q8NCR6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMRP1Q8NCR6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 ABCB10P4-201ENST00000566803 2184 ntBASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms