Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 C1orf229-201ENST00000623686 2258 ntBASIC20.11■□□□□ 0.81
EXD3Q8N9H8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 AF201337.1-201ENST00000520239 748 ntBASIC20.11■□□□□ 0.81
EXD3Q8N9H8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 UBE2DNL-204ENST00000602536 740 ntBASIC20.11■□□□□ 0.81
EXD3Q8N9H8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
EXD3Q8N9H8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 AC105036.2-201ENST00000569468 176 ntBASIC20.1■□□□□ 0.81
EXD3Q8N9H8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 AL117328.2-201ENST00000624617 1940 ntBASIC20.1■□□□□ 0.81
EXD3Q8N9H8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
EXD3Q8N9H8 AC233723.2-201ENST00000623798 2106 ntBASIC20.09■□□□□ 0.81
EXD3Q8N9H8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EXD3Q8N9H8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.09■□□□□ 0.81
EXD3Q8N9H8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EXD3Q8N9H8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EXD3Q8N9H8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
EXD3Q8N9H8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
EXD3Q8N9H8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EXD3Q8N9H8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
EXD3Q8N9H8 AC079630.1-202ENST00000618127 1840 ntBASIC20.09■□□□□ 0.81
EXD3Q8N9H8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EXD3Q8N9H8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
EXD3Q8N9H8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EXD3Q8N9H8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EXD3Q8N9H8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.08■□□□□ 0.81
EXD3Q8N9H8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EXD3Q8N9H8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
EXD3Q8N9H8 RPS2P52-201ENST00000469610 820 ntBASIC20.08■□□□□ 0.81
EXD3Q8N9H8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.08■□□□□ 0.81
EXD3Q8N9H8 AC068587.7-201ENST00000641602 218 ntBASIC20.08■□□□□ 0.81
EXD3Q8N9H8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
EXD3Q8N9H8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 AC010141.3-201ENST00000456659 717 ntBASIC20.07■□□□□ 0.8
EXD3Q8N9H8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXD3Q8N9H8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 RNA5SP413-201ENST00000516373 109 ntBASIC20.06■□□□□ 0.8
EXD3Q8N9H8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 AC133552.2-202ENST00000575694 574 ntBASIC20.06■□□□□ 0.8
EXD3Q8N9H8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
EXD3Q8N9H8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
EXD3Q8N9H8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms