Protein–RNA interactions for Protein: Q8N8R3

SLC25A29, Mitochondrial basic amino acids transporter, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A29Q8N8R3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC25A29Q8N8R3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A29Q8N8R3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A29Q8N8R3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 AC079089.2-201ENST00000531211 1277 ntBASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 AC087239.1-201ENST00000622671 572 ntBASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A29Q8N8R3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 AL136116.3-201ENST00000402907 1138 ntBASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A29Q8N8R3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 AC010525.1-201ENST00000585559 441 ntBASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 AC131212.1-201ENST00000613771 668 ntBASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 AC011298.3-201ENST00000615796 283 ntBASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 AC136469.2-201ENST00000623944 1028 ntBASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A29Q8N8R3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A29Q8N8R3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 FAM99A-202ENST00000538190 1989 ntBASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 OR7E47P-201ENST00000546390 1422 ntBASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A29Q8N8R3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms