Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH20Q8N6Y1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH20Q8N6Y1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH20Q8N6Y1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH20Q8N6Y1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 AC022517.1-201ENST00000592429 346 ntBASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 AP004607.4-201ENST00000530158 1459 ntBASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH20Q8N6Y1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH20Q8N6Y1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 AC004854.2-201ENST00000608450 1441 ntBASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 KRT18P61-201ENST00000585825 1298 ntBASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH20Q8N6Y1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 KRT87P-202ENST00000534226 1464 ntBASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 AP006587.3-201ENST00000525742 1516 ntBASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms