Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF7Q8N684 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF7Q8N684 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF7Q8N684 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF7Q8N684 AL157384.1-201ENST00000445995 2473 ntBASIC20.8■□□□□ 0.92
CPSF7Q8N684 AC009102.2-201ENST00000606772 1639 ntBASIC20.8■□□□□ 0.92
CPSF7Q8N684 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.8■□□□□ 0.92
CPSF7Q8N684 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF7Q8N684 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.8■□□□□ 0.92
CPSF7Q8N684 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF7Q8N684 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF7Q8N684 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CPSF7Q8N684 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF7Q8N684 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF7Q8N684 AC135279.3-201ENST00000610945 1311 ntBASIC20.79■□□□□ 0.92
CPSF7Q8N684 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF7Q8N684 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CPSF7Q8N684 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.79■□□□□ 0.92
CPSF7Q8N684 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.79■□□□□ 0.92
CPSF7Q8N684 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF7Q8N684 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF7Q8N684 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF7Q8N684 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF7Q8N684 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.78■□□□□ 0.92
CPSF7Q8N684 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.78■□□□□ 0.92
CPSF7Q8N684 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 AC024257.2-201ENST00000549699 147 ntBASIC20.78■□□□□ 0.92
CPSF7Q8N684 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.78■□□□□ 0.92
CPSF7Q8N684 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.78■□□□□ 0.92
CPSF7Q8N684 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.78■□□□□ 0.92
CPSF7Q8N684 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPSF7Q8N684 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPSF7Q8N684 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPSF7Q8N684 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPSF7Q8N684 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CPSF7Q8N684 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.77■□□□□ 0.92
CPSF7Q8N684 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPSF7Q8N684 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPSF7Q8N684 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CPSF7Q8N684 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.77■□□□□ 0.92
CPSF7Q8N684 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPSF7Q8N684 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.77■□□□□ 0.91
CPSF7Q8N684 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CPSF7Q8N684 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.77■□□□□ 0.91
CPSF7Q8N684 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 AC026471.6-201ENST00000622954 1905 ntBASIC20.76■□□□□ 0.91
CPSF7Q8N684 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.76■□□□□ 0.91
CPSF7Q8N684 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CPSF7Q8N684 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 AL121603.2-201ENST00000557373 2117 ntBASIC20.76■□□□□ 0.91
CPSF7Q8N684 AC142381.2-201ENST00000566120 298 ntBASIC20.76■□□□□ 0.91
CPSF7Q8N684 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.76■□□□□ 0.91
CPSF7Q8N684 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CPSF7Q8N684 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CPSF7Q8N684 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.76■□□□□ 0.91
CPSF7Q8N684 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPSF7Q8N684 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF7Q8N684 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF7Q8N684 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF7Q8N684 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.75■□□□□ 0.91
CPSF7Q8N684 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CPSF7Q8N684 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CPSF7Q8N684 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CPSF7Q8N684 C17orf82-201ENST00000623772 1530 ntBASIC20.75■□□□□ 0.91
CPSF7Q8N684 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF7Q8N684 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF7Q8N684 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF7Q8N684 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
CPSF7Q8N684 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.75■□□□□ 0.91
CPSF7Q8N684 AL499627.2-201ENST00000606283 725 ntBASIC20.75■□□□□ 0.91
CPSF7Q8N684 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF7Q8N684 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPSF7Q8N684 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.75■□□□□ 0.91
CPSF7Q8N684 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF7Q8N684 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF7Q8N684 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CPSF7Q8N684 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CPSF7Q8N684 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF7Q8N684 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF7Q8N684 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF7Q8N684 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF7Q8N684 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF7Q8N684 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms