Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.72■■□□□ 1.23
TTC39CQ8N584 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
TTC39CQ8N584 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TTC39CQ8N584 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC39CQ8N584 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC39CQ8N584 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TTC39CQ8N584 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
TTC39CQ8N584 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
TTC39CQ8N584 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39CQ8N584 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
TTC39CQ8N584 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39CQ8N584 AC003102.1-202ENST00000563394 1796 ntBASIC22.71■■□□□ 1.23
TTC39CQ8N584 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39CQ8N584 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.71■■□□□ 1.23
TTC39CQ8N584 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39CQ8N584 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.71■■□□□ 1.23
TTC39CQ8N584 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.71■■□□□ 1.23
TTC39CQ8N584 RARRES2P6-201ENST00000567333 442 ntBASIC22.71■■□□□ 1.23
TTC39CQ8N584 KRT87P-202ENST00000534226 1464 ntBASIC22.71■■□□□ 1.23
TTC39CQ8N584 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39CQ8N584 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39CQ8N584 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.71■■□□□ 1.23
TTC39CQ8N584 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39CQ8N584 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
TTC39CQ8N584 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39CQ8N584 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39CQ8N584 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39CQ8N584 AC034268.1-201ENST00000441047 882 ntBASIC22.7■■□□□ 1.22
TTC39CQ8N584 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39CQ8N584 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.7■■□□□ 1.22
TTC39CQ8N584 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.7■■□□□ 1.22
TTC39CQ8N584 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39CQ8N584 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39CQ8N584 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.7■■□□□ 1.22
TTC39CQ8N584 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39CQ8N584 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39CQ8N584 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39CQ8N584 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.69■■□□□ 1.22
TTC39CQ8N584 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.69■■□□□ 1.22
TTC39CQ8N584 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.69■■□□□ 1.22
TTC39CQ8N584 AC026271.2-201ENST00000428091 497 ntBASIC22.69■■□□□ 1.22
TTC39CQ8N584 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.69■■□□□ 1.22
TTC39CQ8N584 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39CQ8N584 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39CQ8N584 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.69■■□□□ 1.22
TTC39CQ8N584 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39CQ8N584 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.69■■□□□ 1.22
TTC39CQ8N584 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39CQ8N584 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC39CQ8N584 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC39CQ8N584 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TTC39CQ8N584 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC39CQ8N584 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TTC39CQ8N584 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.67■■□□□ 1.22
TTC39CQ8N584 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.67■■□□□ 1.22
TTC39CQ8N584 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.67■■□□□ 1.22
TTC39CQ8N584 AC053503.5-201ENST00000601508 636 ntBASIC22.67■■□□□ 1.22
TTC39CQ8N584 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39CQ8N584 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.66■■□□□ 1.22
TTC39CQ8N584 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39CQ8N584 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39CQ8N584 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.66■■□□□ 1.22
TTC39CQ8N584 EEF1DP3-203ENST00000566025 782 ntBASIC22.66■■□□□ 1.22
TTC39CQ8N584 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39CQ8N584 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.66■■□□□ 1.22
TTC39CQ8N584 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39CQ8N584 AC026471.6-201ENST00000622954 1905 ntBASIC22.66■■□□□ 1.22
TTC39CQ8N584 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39CQ8N584 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39CQ8N584 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.65■■□□□ 1.22
TTC39CQ8N584 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39CQ8N584 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39CQ8N584 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.65■■□□□ 1.22
TTC39CQ8N584 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.65■■□□□ 1.22
TTC39CQ8N584 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.65■■□□□ 1.22
TTC39CQ8N584 AC087623.3-201ENST00000607047 1098 ntBASIC22.65■■□□□ 1.22
TTC39CQ8N584 MIR5787-201ENST00000611784 55 ntBASIC22.65■■□□□ 1.22
TTC39CQ8N584 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TTC39CQ8N584 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39CQ8N584 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms