Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 C1orf229-201ENST00000623686 2258 ntBASIC23.85■■□□□ 1.41
TRIM50Q86XT4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM50Q86XT4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM50Q86XT4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM50Q86XT4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
TRIM50Q86XT4 AL109923.1-201ENST00000618799 583 ntBASIC23.85■■□□□ 1.41
TRIM50Q86XT4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
TRIM50Q86XT4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM50Q86XT4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM50Q86XT4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
TRIM50Q86XT4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM50Q86XT4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 AL355802.2-201ENST00000402069 882 ntBASIC23.83■■□□□ 1.41
TRIM50Q86XT4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM50Q86XT4 EEF1DP3-203ENST00000566025 782 ntBASIC23.83■■□□□ 1.41
TRIM50Q86XT4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM50Q86XT4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM50Q86XT4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM50Q86XT4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM50Q86XT4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.8■■□□□ 1.4
TRIM50Q86XT4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM50Q86XT4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.8■■□□□ 1.4
TRIM50Q86XT4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM50Q86XT4 CNN2P6-201ENST00000439038 900 ntBASIC23.8■■□□□ 1.4
TRIM50Q86XT4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM50Q86XT4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM50Q86XT4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM50Q86XT4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM50Q86XT4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM50Q86XT4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.79■■□□□ 1.4
TRIM50Q86XT4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
TRIM50Q86XT4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM50Q86XT4 AC007322.1-201ENST00000426983 750 ntBASIC23.79■■□□□ 1.4
TRIM50Q86XT4 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.79■■□□□ 1.4
TRIM50Q86XT4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM50Q86XT4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.79■■□□□ 1.4
TRIM50Q86XT4 AC005181.1-201ENST00000604782 1256 ntBASIC23.79■■□□□ 1.4
TRIM50Q86XT4 AC231657.2-201ENST00000624556 255 ntBASIC23.79■■□□□ 1.4
TRIM50Q86XT4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM50Q86XT4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM50Q86XT4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 GPX1P1-201ENST00000388829 606 ntBASIC23.78■■□□□ 1.4
TRIM50Q86XT4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM50Q86XT4 SLC7A5P2-201ENST00000553010 536 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms