Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 MIPEPP3-201ENST00000412105 444 ntBASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 AC026366.1-201ENST00000488803 879 ntBASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 AP006294.2-201ENST00000641667 209 ntBASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 MIR1224-201ENST00000408193 85 ntBASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 EEF1DP3-203ENST00000566025 782 ntBASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS13BQ7Z7G8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 MIR4758-201ENST00000577688 71 ntBASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 TERF1P5-201ENST00000477545 1207 ntBASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.28□□□□□ -0.28
VPS13BQ7Z7G8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC13.27□□□□□ -0.28
VPS13BQ7Z7G8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VPS13BQ7Z7G8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VPS13BQ7Z7G8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13BQ7Z7G8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 AL158047.1-201ENST00000445918 881 ntBASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 AC091874.3-201ENST00000512672 1195 ntBASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 AC142381.4-202ENST00000563973 229 ntBASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13BQ7Z7G8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 Z99916.2-201ENST00000604037 246 ntBASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 242.9 ms