Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 AC026471.6-201ENST00000622954 1905 ntBASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 MIR935-201ENST00000401179 91 ntBASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 CCDC92B-201ENST00000575506 885 ntBASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PPP4R3AQ6IN85 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
PPP4R3AQ6IN85 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
PPP4R3AQ6IN85 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP4R3AQ6IN85 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 AC003102.1-202ENST00000563394 1796 ntBASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 AC087623.3-201ENST00000607047 1098 ntBASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPP4R3AQ6IN85 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 KRT18P14-201ENST00000534205 1250 ntBASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PPP4R3AQ6IN85 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.47
PPP4R3AQ6IN85 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.2■■□□□ 1.47
PPP4R3AQ6IN85 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
PPP4R3AQ6IN85 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PPP4R3AQ6IN85 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.2■■□□□ 1.46
PPP4R3AQ6IN85 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PPP4R3AQ6IN85 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PPP4R3AQ6IN85 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.2■■□□□ 1.46
PPP4R3AQ6IN85 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PPP4R3AQ6IN85 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.2■■□□□ 1.46
PPP4R3AQ6IN85 DUX4L2-201ENST00000561772 1275 ntBASIC24.2■■□□□ 1.46
PPP4R3AQ6IN85 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.2■■□□□ 1.46
PPP4R3AQ6IN85 DUX4L6-201ENST00000626483 1275 ntBASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms