Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF43Q68DV7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RNF43Q68DV7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RNF43Q68DV7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
RNF43Q68DV7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF43Q68DV7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF43Q68DV7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RNF43Q68DV7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.34■■□□□ 1.17
RNF43Q68DV7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF43Q68DV7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF43Q68DV7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF43Q68DV7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF43Q68DV7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF43Q68DV7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.33■■□□□ 1.17
RNF43Q68DV7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF43Q68DV7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF43Q68DV7 LINC01960-201ENST00000563759 1884 ntBASIC22.32■■□□□ 1.16
RNF43Q68DV7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
RNF43Q68DV7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF43Q68DV7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF43Q68DV7 BX005040.4-201ENST00000637145 1518 ntBASIC22.32■■□□□ 1.16
RNF43Q68DV7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF43Q68DV7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF43Q68DV7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF43Q68DV7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF43Q68DV7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RNF43Q68DV7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF43Q68DV7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF43Q68DV7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF43Q68DV7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF43Q68DV7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF43Q68DV7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF43Q68DV7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF43Q68DV7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.31■■□□□ 1.16
RNF43Q68DV7 KRT18P14-201ENST00000534205 1250 ntBASIC22.31■■□□□ 1.16
RNF43Q68DV7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF43Q68DV7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF43Q68DV7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
RNF43Q68DV7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF43Q68DV7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF43Q68DV7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF43Q68DV7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF43Q68DV7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF43Q68DV7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RNF43Q68DV7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RNF43Q68DV7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.3■■□□□ 1.16
RNF43Q68DV7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF43Q68DV7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF43Q68DV7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF43Q68DV7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF43Q68DV7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
RNF43Q68DV7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.29■■□□□ 1.16
RNF43Q68DV7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
RNF43Q68DV7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF43Q68DV7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF43Q68DV7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF43Q68DV7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF43Q68DV7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF43Q68DV7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RNF43Q68DV7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
RNF43Q68DV7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF43Q68DV7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF43Q68DV7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF43Q68DV7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF43Q68DV7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF43Q68DV7 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF43Q68DV7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF43Q68DV7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF43Q68DV7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF43Q68DV7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF43Q68DV7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF43Q68DV7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RNF43Q68DV7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF43Q68DV7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RNF43Q68DV7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RNF43Q68DV7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF43Q68DV7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.28■■□□□ 1.16
RNF43Q68DV7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF43Q68DV7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
RNF43Q68DV7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.28■■□□□ 1.16
RNF43Q68DV7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF43Q68DV7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF43Q68DV7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF43Q68DV7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF43Q68DV7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF43Q68DV7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF43Q68DV7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF43Q68DV7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF43Q68DV7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
RNF43Q68DV7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms