Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VARS2Q5ST30 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.68■■□□□ 1.22
VARS2Q5ST30 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
VARS2Q5ST30 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VARS2Q5ST30 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VARS2Q5ST30 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.68■■□□□ 1.22
VARS2Q5ST30 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
VARS2Q5ST30 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.68■■□□□ 1.22
VARS2Q5ST30 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.68■■□□□ 1.22
VARS2Q5ST30 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VARS2Q5ST30 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VARS2Q5ST30 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.67■■□□□ 1.22
VARS2Q5ST30 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VARS2Q5ST30 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.67■■□□□ 1.22
VARS2Q5ST30 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VARS2Q5ST30 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.67■■□□□ 1.22
VARS2Q5ST30 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.67■■□□□ 1.22
VARS2Q5ST30 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.67■■□□□ 1.22
VARS2Q5ST30 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.67■■□□□ 1.22
VARS2Q5ST30 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.67■■□□□ 1.22
VARS2Q5ST30 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.67■■□□□ 1.22
VARS2Q5ST30 AL109923.1-201ENST00000618799 583 ntBASIC22.67■■□□□ 1.22
VARS2Q5ST30 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VARS2Q5ST30 TMEM191A-211ENST00000637163 1067 ntBASIC22.67■■□□□ 1.22
VARS2Q5ST30 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
VARS2Q5ST30 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VARS2Q5ST30 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
VARS2Q5ST30 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 C9orf163-202ENST00000624034 2573 ntBASIC22.66■■□□□ 1.22
VARS2Q5ST30 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.66■■□□□ 1.22
VARS2Q5ST30 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
VARS2Q5ST30 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
VARS2Q5ST30 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 AC007322.1-201ENST00000426983 750 ntBASIC22.66■■□□□ 1.22
VARS2Q5ST30 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
VARS2Q5ST30 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.66■■□□□ 1.22
VARS2Q5ST30 AL050303.2-201ENST00000619798 666 ntBASIC22.66■■□□□ 1.22
VARS2Q5ST30 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.66■■□□□ 1.22
VARS2Q5ST30 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 C1orf229-201ENST00000623686 2258 ntBASIC22.66■■□□□ 1.22
VARS2Q5ST30 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.66■■□□□ 1.22
VARS2Q5ST30 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VARS2Q5ST30 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VARS2Q5ST30 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VARS2Q5ST30 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.65■■□□□ 1.22
VARS2Q5ST30 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
VARS2Q5ST30 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VARS2Q5ST30 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.65■■□□□ 1.22
VARS2Q5ST30 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.65■■□□□ 1.22
VARS2Q5ST30 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.65■■□□□ 1.22
VARS2Q5ST30 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VARS2Q5ST30 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.65■■□□□ 1.22
VARS2Q5ST30 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VARS2Q5ST30 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
VARS2Q5ST30 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.64■■□□□ 1.21
VARS2Q5ST30 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.64■■□□□ 1.21
VARS2Q5ST30 AC005181.1-201ENST00000604782 1256 ntBASIC22.64■■□□□ 1.21
VARS2Q5ST30 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.64■■□□□ 1.21
VARS2Q5ST30 AC010536.3-201ENST00000620306 533 ntBASIC22.64■■□□□ 1.21
VARS2Q5ST30 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VARS2Q5ST30 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VARS2Q5ST30 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
VARS2Q5ST30 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VARS2Q5ST30 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.63■■□□□ 1.21
VARS2Q5ST30 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VARS2Q5ST30 GPX1P1-201ENST00000388829 606 ntBASIC22.63■■□□□ 1.21
VARS2Q5ST30 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.63■■□□□ 1.21
VARS2Q5ST30 CNN2P6-201ENST00000439038 900 ntBASIC22.63■■□□□ 1.21
VARS2Q5ST30 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.63■■□□□ 1.21
VARS2Q5ST30 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VARS2Q5ST30 SLC7A5P2-201ENST00000553010 536 ntBASIC22.63■■□□□ 1.21
VARS2Q5ST30 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.63■■□□□ 1.21
VARS2Q5ST30 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VARS2Q5ST30 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VARS2Q5ST30 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VARS2Q5ST30 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VARS2Q5ST30 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VARS2Q5ST30 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VARS2Q5ST30 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.62■■□□□ 1.21
VARS2Q5ST30 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.62■■□□□ 1.21
VARS2Q5ST30 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VARS2Q5ST30 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.62■■□□□ 1.21
VARS2Q5ST30 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.62■■□□□ 1.21
VARS2Q5ST30 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
VARS2Q5ST30 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VARS2Q5ST30 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VARS2Q5ST30 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
VARS2Q5ST30 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
VARS2Q5ST30 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
VARS2Q5ST30 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VARS2Q5ST30 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.61■■□□□ 1.21
VARS2Q5ST30 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VARS2Q5ST30 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
VARS2Q5ST30 AL355802.2-201ENST00000402069 882 ntBASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms