Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 POU5F1P4-201ENST00000413175 1085 ntBASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 MIR4758-201ENST00000577688 71 ntBASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.14■□□□□ 0.66
KRTCAP3Q53RY4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 OR10C1-204ENST00000622521 1039 ntBASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 AC008694.1-202ENST00000636953 945 ntBASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRTCAP3Q53RY4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 AC068338.2-201ENST00000563278 1430 ntBASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KRTCAP3Q53RY4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 AL512625.2-201ENST00000417533 625 ntBASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 TSPY20P-201ENST00000450910 630 ntBASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 AC069236.1-201ENST00000604339 616 ntBASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRTCAP3Q53RY4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRTCAP3Q53RY4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRTCAP3Q53RY4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRTCAP3Q53RY4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRTCAP3Q53RY4 AC137767.1-201ENST00000602918 1920 ntBASIC19.1■□□□□ 0.65
KRTCAP3Q53RY4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRTCAP3Q53RY4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms