Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
USH1GQ495M9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
USH1GQ495M9 CDCA4P2-201ENST00000441182 718 ntBASIC24.56■■□□□ 1.52
USH1GQ495M9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.56■■□□□ 1.52
USH1GQ495M9 UBE2DNL-204ENST00000602536 740 ntBASIC24.56■■□□□ 1.52
USH1GQ495M9 AC011767.1-201ENST00000617410 1153 ntBASIC24.56■■□□□ 1.52
USH1GQ495M9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
USH1GQ495M9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
USH1GQ495M9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.55■■□□□ 1.52
USH1GQ495M9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
USH1GQ495M9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.55■■□□□ 1.52
USH1GQ495M9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.55■■□□□ 1.52
USH1GQ495M9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
USH1GQ495M9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
USH1GQ495M9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
USH1GQ495M9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
USH1GQ495M9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
USH1GQ495M9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
USH1GQ495M9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
USH1GQ495M9 KRT18P11-201ENST00000435214 1283 ntBASIC24.54■■□□□ 1.52
USH1GQ495M9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
USH1GQ495M9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
USH1GQ495M9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
USH1GQ495M9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.54■■□□□ 1.52
USH1GQ495M9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
USH1GQ495M9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.53■■□□□ 1.52
USH1GQ495M9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.53■■□□□ 1.52
USH1GQ495M9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
USH1GQ495M9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
USH1GQ495M9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
USH1GQ495M9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
USH1GQ495M9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
USH1GQ495M9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
USH1GQ495M9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
USH1GQ495M9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
USH1GQ495M9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.52■■□□□ 1.52
USH1GQ495M9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
USH1GQ495M9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
USH1GQ495M9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.52■■□□□ 1.52
USH1GQ495M9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.52■■□□□ 1.52
USH1GQ495M9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.52■■□□□ 1.52
USH1GQ495M9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.52■■□□□ 1.52
USH1GQ495M9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.52■■□□□ 1.52
USH1GQ495M9 RAP2CP1-201ENST00000605103 478 ntBASIC24.52■■□□□ 1.52
USH1GQ495M9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.52■■□□□ 1.52
USH1GQ495M9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
USH1GQ495M9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
USH1GQ495M9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.51■■□□□ 1.51
USH1GQ495M9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
USH1GQ495M9 AC092053.2-201ENST00000640557 1818 ntBASIC24.51■■□□□ 1.51
USH1GQ495M9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
USH1GQ495M9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
USH1GQ495M9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
USH1GQ495M9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.51■■□□□ 1.51
USH1GQ495M9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.51■■□□□ 1.51
USH1GQ495M9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.51■■□□□ 1.51
USH1GQ495M9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.51■■□□□ 1.51
USH1GQ495M9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.51■■□□□ 1.51
USH1GQ495M9 MFSD11-216ENST00000590393 1141 ntBASIC24.51■■□□□ 1.51
USH1GQ495M9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.51■■□□□ 1.51
USH1GQ495M9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
USH1GQ495M9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
USH1GQ495M9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
USH1GQ495M9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
USH1GQ495M9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.51■■□□□ 1.51
USH1GQ495M9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
USH1GQ495M9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
USH1GQ495M9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
USH1GQ495M9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.5■■□□□ 1.51
USH1GQ495M9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.5■■□□□ 1.51
USH1GQ495M9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
USH1GQ495M9 AC010141.2-201ENST00000452426 721 ntBASIC24.5■■□□□ 1.51
USH1GQ495M9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
USH1GQ495M9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.5■■□□□ 1.51
USH1GQ495M9 EEF1DP3-203ENST00000566025 782 ntBASIC24.5■■□□□ 1.51
USH1GQ495M9 AC138907.5-202ENST00000569484 235 ntBASIC24.5■■□□□ 1.51
USH1GQ495M9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.5■■□□□ 1.51
USH1GQ495M9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
USH1GQ495M9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.5■■□□□ 1.51
USH1GQ495M9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
USH1GQ495M9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
USH1GQ495M9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
USH1GQ495M9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.49■■□□□ 1.51
USH1GQ495M9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.49■■□□□ 1.51
USH1GQ495M9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.49■■□□□ 1.51
USH1GQ495M9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
USH1GQ495M9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.49■■□□□ 1.51
USH1GQ495M9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.49■■□□□ 1.51
USH1GQ495M9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
USH1GQ495M9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms