Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX4Q33E94 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RFX4Q33E94 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.79■□□□□ 0.76
RFX4Q33E94 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX4Q33E94 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX4Q33E94 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX4Q33E94 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RFX4Q33E94 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX4Q33E94 C17orf82-201ENST00000623772 1530 ntBASIC19.78■□□□□ 0.76
RFX4Q33E94 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RFX4Q33E94 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX4Q33E94 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX4Q33E94 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.78■□□□□ 0.76
RFX4Q33E94 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX4Q33E94 AC010997.5-201ENST00000609182 354 ntBASIC19.78■□□□□ 0.76
RFX4Q33E94 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX4Q33E94 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX4Q33E94 LINC01006-201ENST00000333319 2292 ntBASIC19.78■□□□□ 0.76
RFX4Q33E94 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX4Q33E94 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RFX4Q33E94 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RFX4Q33E94 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX4Q33E94 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RFX4Q33E94 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RFX4Q33E94 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RFX4Q33E94 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RFX4Q33E94 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX4Q33E94 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX4Q33E94 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX4Q33E94 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RFX4Q33E94 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
RFX4Q33E94 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX4Q33E94 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX4Q33E94 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX4Q33E94 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RFX4Q33E94 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX4Q33E94 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RFX4Q33E94 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX4Q33E94 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX4Q33E94 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RFX4Q33E94 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.77■□□□□ 0.75
RFX4Q33E94 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX4Q33E94 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.76■□□□□ 0.75
RFX4Q33E94 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX4Q33E94 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX4Q33E94 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX4Q33E94 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX4Q33E94 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX4Q33E94 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.76■□□□□ 0.75
RFX4Q33E94 AC239859.2-201ENST00000444165 318 ntBASIC19.76■□□□□ 0.75
RFX4Q33E94 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.76■□□□□ 0.75
RFX4Q33E94 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX4Q33E94 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.76■□□□□ 0.75
RFX4Q33E94 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RFX4Q33E94 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX4Q33E94 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX4Q33E94 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RFX4Q33E94 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX4Q33E94 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX4Q33E94 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX4Q33E94 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX4Q33E94 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX4Q33E94 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX4Q33E94 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX4Q33E94 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX4Q33E94 FEM1AP1-201ENST00000431297 1995 ntBASIC19.75■□□□□ 0.75
RFX4Q33E94 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX4Q33E94 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX4Q33E94 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX4Q33E94 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RFX4Q33E94 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RFX4Q33E94 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX4Q33E94 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX4Q33E94 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RFX4Q33E94 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX4Q33E94 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX4Q33E94 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RFX4Q33E94 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX4Q33E94 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
RFX4Q33E94 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms