Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC38.22■■■■□ 3.71
HMGXB3Q12766 AL139125.2-201ENST00000623134 1869 ntBASIC38.22■■■■□ 3.71
HMGXB3Q12766 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC38.21■■■■□ 3.71
HMGXB3Q12766 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC38.21■■■■□ 3.71
HMGXB3Q12766 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC38.21■■■■□ 3.71
HMGXB3Q12766 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
HMGXB3Q12766 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC38.21■■■■□ 3.71
HMGXB3Q12766 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC38.21■■■■□ 3.71
HMGXB3Q12766 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
HMGXB3Q12766 MED17-227ENST00000640521 2047 ntTSL 5 BASIC38.2■■■■□ 3.71
HMGXB3Q12766 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
HMGXB3Q12766 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC38.2■■■■□ 3.71
HMGXB3Q12766 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
HMGXB3Q12766 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC38.2■■■■□ 3.71
HMGXB3Q12766 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC38.19■■■■□ 3.7
HMGXB3Q12766 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
HMGXB3Q12766 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
HMGXB3Q12766 FAM210CP-201ENST00000445714 574 ntBASIC38.19■■■■□ 3.7
HMGXB3Q12766 AC243732.1-201ENST00000612648 864 ntBASIC38.19■■■■□ 3.7
HMGXB3Q12766 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
HMGXB3Q12766 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC38.19■■■■□ 3.7
HMGXB3Q12766 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC38.18■■■■□ 3.7
HMGXB3Q12766 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC38.18■■■■□ 3.7
HMGXB3Q12766 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC38.18■■■■□ 3.7
HMGXB3Q12766 AC060766.5-201ENST00000590539 871 ntBASIC38.18■■■■□ 3.7
HMGXB3Q12766 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC38.18■■■■□ 3.7
HMGXB3Q12766 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC38.18■■■■□ 3.7
HMGXB3Q12766 MIR718-201ENST00000390190 70 ntBASIC38.17■■■■□ 3.7
HMGXB3Q12766 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
HMGXB3Q12766 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC38.17■■■■□ 3.7
HMGXB3Q12766 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC38.17■■■■□ 3.7
HMGXB3Q12766 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC38.17■■■■□ 3.7
HMGXB3Q12766 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC38.17■■■■□ 3.7
HMGXB3Q12766 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC38.17■■■■□ 3.7
HMGXB3Q12766 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
HMGXB3Q12766 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC38.16■■■■□ 3.7
HMGXB3Q12766 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC38.16■■■■□ 3.7
HMGXB3Q12766 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC38.16■■■■□ 3.7
HMGXB3Q12766 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC38.16■■■■□ 3.7
HMGXB3Q12766 OR2A1-AS1-201ENST00000462305 773 ntBASIC38.16■■■■□ 3.7
HMGXB3Q12766 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC38.16■■■■□ 3.7
HMGXB3Q12766 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
HMGXB3Q12766 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
HMGXB3Q12766 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
HMGXB3Q12766 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC38.15■■■■□ 3.7
HMGXB3Q12766 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC38.15■■■■□ 3.7
HMGXB3Q12766 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC38.15■■■■□ 3.7
HMGXB3Q12766 KRT16P2-201ENST00000414673 1423 ntBASIC38.14■■■■□ 3.7
HMGXB3Q12766 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC38.14■■■■□ 3.7
HMGXB3Q12766 ECEL1P3-201ENST00000427961 737 ntBASIC38.14■■■■□ 3.7
HMGXB3Q12766 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
HMGXB3Q12766 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC38.14■■■■□ 3.7
HMGXB3Q12766 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC38.14■■■■□ 3.7
HMGXB3Q12766 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC38.14■■■■□ 3.7
HMGXB3Q12766 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC38.13■■■■□ 3.7
HMGXB3Q12766 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
HMGXB3Q12766 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC38.13■■■■□ 3.69
HMGXB3Q12766 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC38.13■■■■□ 3.69
HMGXB3Q12766 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.69
HMGXB3Q12766 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
HMGXB3Q12766 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC38.13■■■■□ 3.69
HMGXB3Q12766 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC38.13■■■■□ 3.69
HMGXB3Q12766 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC38.12■■■■□ 3.69
HMGXB3Q12766 GXYLT1P3-201ENST00000453058 1193 ntBASIC38.12■■■■□ 3.69
HMGXB3Q12766 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC38.12■■■■□ 3.69
HMGXB3Q12766 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC38.12■■■■□ 3.69
HMGXB3Q12766 AC010331.1-201ENST00000611423 582 ntBASIC38.12■■■■□ 3.69
HMGXB3Q12766 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
HMGXB3Q12766 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC38.12■■■■□ 3.69
HMGXB3Q12766 MIR1224-201ENST00000408193 85 ntBASIC38.12■■■■□ 3.69
HMGXB3Q12766 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC38.12■■■■□ 3.69
HMGXB3Q12766 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC38.12■■■■□ 3.69
HMGXB3Q12766 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC38.12■■■■□ 3.69
HMGXB3Q12766 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC38.12■■■■□ 3.69
HMGXB3Q12766 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC38.12■■■■□ 3.69
HMGXB3Q12766 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
HMGXB3Q12766 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
HMGXB3Q12766 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
HMGXB3Q12766 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC38.11■■■■□ 3.69
HMGXB3Q12766 CD44-222ENST00000526025 1052 ntTSL 2 BASIC38.11■■■■□ 3.69
HMGXB3Q12766 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC38.11■■■■□ 3.69
HMGXB3Q12766 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC38.11■■■■□ 3.69
HMGXB3Q12766 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
HMGXB3Q12766 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC38.1■■■■□ 3.69
HMGXB3Q12766 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC38.1■■■■□ 3.69
HMGXB3Q12766 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
HMGXB3Q12766 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC38.1■■■■□ 3.69
HMGXB3Q12766 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC38.1■■■■□ 3.69
HMGXB3Q12766 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC38.1■■■■□ 3.69
HMGXB3Q12766 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC38.1■■■■□ 3.69
HMGXB3Q12766 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
HMGXB3Q12766 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
HMGXB3Q12766 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
HMGXB3Q12766 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC38.09■■■■□ 3.69
HMGXB3Q12766 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC38.09■■■■□ 3.69
HMGXB3Q12766 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC38.09■■■■□ 3.69
HMGXB3Q12766 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC38.09■■■■□ 3.69
HMGXB3Q12766 GATS-209ENST00000454084 1030 ntTSL 3 BASIC38.09■■■■□ 3.69
HMGXB3Q12766 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC38.09■■■■□ 3.69
HMGXB3Q12766 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC38.09■■■■□ 3.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms