Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 EMP70YLR083C 2004 nt2.88□□□□□ -1.95
RRP40Q08285 FAA2YER015W 2235 nt2.88□□□□□ -1.95
RRP40Q08285 TMA108YIL137C 2841 nt2.87□□□□□ -1.95
RRP40Q08285 YDL162CYDL162C 357 nt2.87□□□□□ -1.95
RRP40Q08285 RRP8YDR083W 1179 nt2.87□□□□□ -1.95
RRP40Q08285 LIF1YGL090W 1266 nt2.87□□□□□ -1.95
RRP40Q08285 THP2YHR167W 786 nt2.87□□□□□ -1.95
RRP40Q08285 RPC17YJL011C 486 nt2.87□□□□□ -1.95
RRP40Q08285 MSA2YKR077W 1092 nt2.87□□□□□ -1.95
RRP40Q08285 HRT3YLR097C 1035 nt2.87□□□□□ -1.95
RRP40Q08285 YBR300CYBR300C 498 nt2.87□□□□□ -1.95
RRP40Q08285 ACA1YER045C 1470 nt2.87□□□□□ -1.95
RRP40Q08285 TEC1YBR083W 1461 nt2.87□□□□□ -1.95
RRP40Q08285 PST1YDR055W 1335 nt2.87□□□□□ -1.95
RRP40Q08285 YPL109CYPL109C 1974 nt2.87□□□□□ -1.95
RRP40Q08285 RPA190YOR341W 4995 nt2.86□□□□□ -1.95
RRP40Q08285 AEP2YMR282C 1743 nt2.86□□□□□ -1.95
RRP40Q08285 BSC2YDR275W 708 nt2.86□□□□□ -1.95
RRP40Q08285 KXD1YGL079W 657 nt2.86□□□□□ -1.95
RRP40Q08285 AML1YGR001C 747 nt2.86□□□□□ -1.95
RRP40Q08285 YAL069WYAL069W 315 nt2.86□□□□□ -1.95
RRP40Q08285 REX3YLR107W 1215 nt2.86□□□□□ -1.95
RRP40Q08285 OXR1YPL196W 822 nt2.86□□□□□ -1.95
RRP40Q08285 ARO4YBR249C 1113 nt2.86□□□□□ -1.95
RRP40Q08285 RGC1YPR115W 3252 nt2.86□□□□□ -1.95
RRP40Q08285 TIF4631YGR162W 2859 nt2.86□□□□□ -1.95
RRP40Q08285 SLI1YGR212W 1407 nt2.85□□□□□ -1.95
RRP40Q08285 DSF2YBR007C 2211 nt2.85□□□□□ -1.95
RRP40Q08285 ALG8YOR067C 1734 nt2.85□□□□□ -1.95
RRP40Q08285 MED2YDL005C 1296 nt2.85□□□□□ -1.95
RRP40Q08285 TGL2YDR058C 981 nt2.85□□□□□ -1.95
RRP40Q08285 PPH3YDR075W 927 nt2.85□□□□□ -1.95
RRP40Q08285 EDC1YGL222C 528 nt2.85□□□□□ -1.95
RRP40Q08285 YAR075WYAR075W 474 nt2.85□□□□□ -1.95
RRP40Q08285 RPN13YLR421C 471 nt2.85□□□□□ -1.95
RRP40Q08285 CSM3YMR048W 954 nt2.85□□□□□ -1.95
RRP40Q08285 HUB1YNR032C-A 222 nt2.85□□□□□ -1.95
RRP40Q08285 CYC2YOR037W 1101 nt2.85□□□□□ -1.95
RRP40Q08285 YOR263CYOR263C 408 nt2.85□□□□□ -1.95
RRP40Q08285 YPL071CYPL071C 471 nt2.85□□□□□ -1.95
RRP40Q08285 PAM1YDR251W 2493 nt2.85□□□□□ -1.95
RRP40Q08285 CHS2YBR038W 2892 nt2.85□□□□□ -1.95
RRP40Q08285 CCM1YGR150C 2595 nt2.85□□□□□ -1.95
RRP40Q08285 SLH1YGR271W 5904 nt2.85□□□□□ -1.95
RRP40Q08285 CCT7YJL111W 1653 nt2.85□□□□□ -1.95
RRP40Q08285 CTM1YHR109W 1758 nt2.84□□□□□ -1.95
RRP40Q08285 CLB3YDL155W 1284 nt2.84□□□□□ -1.95
RRP40Q08285 PIR1YKL164C 1026 nt2.84□□□□□ -1.95
RRP40Q08285 MTD1YKR080W 963 nt2.84□□□□□ -1.95
RRP40Q08285 RLP7YNL002C 969 nt2.84□□□□□ -1.95
RRP40Q08285 HRT1YOL133W 366 nt2.84□□□□□ -1.95
RRP40Q08285 DGA1YOR245C 1257 nt2.84□□□□□ -1.95
RRP40Q08285 TPK2YPL203W 1143 nt2.84□□□□□ -1.95
RRP40Q08285 SIN4YNL236W 2925 nt2.84□□□□□ -1.96
RRP40Q08285 AEP3YPL005W 1821 nt2.84□□□□□ -1.96
RRP40Q08285 POL3YDL102W 3294 nt2.83□□□□□ -1.96
RRP40Q08285 YIL082W-AYIL082W-A 4497 nt2.83□□□□□ -1.96
RRP40Q08285 YDR355CYDR355C 303 nt2.83□□□□□ -1.96
RRP40Q08285 NKP1YDR383C 717 nt2.83□□□□□ -1.96
RRP40Q08285 YIL175WYIL175W 318 nt2.83□□□□□ -1.96
RRP40Q08285 YJL222W-BYJL222W-B 138 nt2.83□□□□□ -1.96
RRP40Q08285 PCD1YLR151C 1023 nt2.83□□□□□ -1.96
RRP40Q08285 PBA1YLR199C 831 nt2.83□□□□□ -1.96
RRP40Q08285 YBL081WYBL081W 1107 nt2.83□□□□□ -1.96
RRP40Q08285 PEX11YOL147C 711 nt2.83□□□□□ -1.96
RRP40Q08285 BUD21YOR078W 645 nt2.83□□□□□ -1.96
RRP40Q08285 CAF20YOR276W 486 nt2.83□□□□□ -1.96
RRP40Q08285 RPL20BYOR312C 519 nt2.83□□□□□ -1.96
RRP40Q08285 TFC1YBR123C 1950 nt2.83□□□□□ -1.96
RRP40Q08285 DBP5YOR046C 1449 nt2.83□□□□□ -1.96
RRP40Q08285 NMD2YHR077C 3270 nt2.83□□□□□ -1.96
RRP40Q08285 VPS17YOR132W 1656 nt2.82□□□□□ -1.96
RRP40Q08285 MSM1YGR171C 1728 nt2.82□□□□□ -1.96
RRP40Q08285 JJJ1YNL227C 1773 nt2.82□□□□□ -1.96
RRP40Q08285 HEH2YDR458C 1992 nt2.82□□□□□ -1.96
RRP40Q08285 ROG1YGL144C 2058 nt2.82□□□□□ -1.96
RRP40Q08285 PCL2YDL127W 927 nt2.82□□□□□ -1.96
RRP40Q08285 CTH1YDR151C 978 nt2.82□□□□□ -1.96
RRP40Q08285 VMA8YEL051W 771 nt2.82□□□□□ -1.96
RRP40Q08285 YFL051CYFL051C 483 nt2.82□□□□□ -1.96
RRP40Q08285 TAM41YGR046W 1158 nt2.82□□□□□ -1.96
RRP40Q08285 YIR014WYIR014W 729 nt2.82□□□□□ -1.96
RRP40Q08285 IAH1YOR126C 717 nt2.82□□□□□ -1.96
RRP40Q08285 snR34snR34 203 nt2.82□□□□□ -1.96
RRP40Q08285 DRS2YAL026C 4068 nt2.82□□□□□ -1.96
RRP40Q08285 TRM12YML005W 1389 nt2.82□□□□□ -1.96
RRP40Q08285 TSC11YER093C 4293 nt2.82□□□□□ -1.96
RRP40Q08285 MDM1YML104C 3384 nt2.82□□□□□ -1.96
RRP40Q08285 YKL222CYKL222C 2118 nt2.81□□□□□ -1.96
RRP40Q08285 YOR296WYOR296W 3870 nt2.81□□□□□ -1.96
RRP40Q08285 YDR340WYDR340W 303 nt2.81□□□□□ -1.96
RRP40Q08285 YGL214WYGL214W 486 nt2.81□□□□□ -1.96
RRP40Q08285 PPX1YHR201C 1194 nt2.81□□□□□ -1.96
RRP40Q08285 TEM1YML064C 738 nt2.81□□□□□ -1.96
RRP40Q08285 PFK27YOL136C 1194 nt2.81□□□□□ -1.96
RRP40Q08285 RAS1YOR101W 930 nt2.81□□□□□ -1.96
RRP40Q08285 ARG2YJL071W 1725 nt2.81□□□□□ -1.96
RRP40Q08285 YME2YMR302C 2553 nt2.8□□□□□ -1.96
RRP40Q08285 YHL005CYHL005C 393 nt2.8□□□□□ -1.96
RRP40Q08285 GCD14YJL125C 1152 nt2.8□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms