Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COL10A1Q03692 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.96■□□□□ 0.47
COL10A1Q03692 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.96■□□□□ 0.47
COL10A1Q03692 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.96■□□□□ 0.47
COL10A1Q03692 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
COL10A1Q03692 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL10A1Q03692 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.96■□□□□ 0.47
COL10A1Q03692 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.96■□□□□ 0.47
COL10A1Q03692 AC142381.2-201ENST00000566120 298 ntBASIC17.96■□□□□ 0.47
COL10A1Q03692 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.96■□□□□ 0.47
COL10A1Q03692 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COL10A1Q03692 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
COL10A1Q03692 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL10A1Q03692 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
COL10A1Q03692 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
COL10A1Q03692 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.95■□□□□ 0.46
COL10A1Q03692 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL10A1Q03692 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
COL10A1Q03692 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.95■□□□□ 0.46
COL10A1Q03692 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.95■□□□□ 0.46
COL10A1Q03692 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
COL10A1Q03692 AC026471.6-201ENST00000622954 1905 ntBASIC17.95■□□□□ 0.46
COL10A1Q03692 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL10A1Q03692 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL10A1Q03692 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL10A1Q03692 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL10A1Q03692 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.95■□□□□ 0.46
COL10A1Q03692 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.94■□□□□ 0.46
COL10A1Q03692 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COL10A1Q03692 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.94■□□□□ 0.46
COL10A1Q03692 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.94■□□□□ 0.46
COL10A1Q03692 AC005837.3-201ENST00000612163 286 ntBASIC17.94■□□□□ 0.46
COL10A1Q03692 AC105233.4-201ENST00000642045 216 ntBASIC17.94■□□□□ 0.46
COL10A1Q03692 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.94■□□□□ 0.46
COL10A1Q03692 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.94■□□□□ 0.46
COL10A1Q03692 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.94■□□□□ 0.46
COL10A1Q03692 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
COL10A1Q03692 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 AC007375.3-201ENST00000600936 2314 ntBASIC17.94■□□□□ 0.46
COL10A1Q03692 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.94■□□□□ 0.46
COL10A1Q03692 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL10A1Q03692 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.94■□□□□ 0.46
COL10A1Q03692 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.93■□□□□ 0.46
COL10A1Q03692 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
COL10A1Q03692 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL10A1Q03692 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
COL10A1Q03692 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.93■□□□□ 0.46
COL10A1Q03692 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL10A1Q03692 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL10A1Q03692 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL10A1Q03692 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL10A1Q03692 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.92■□□□□ 0.46
COL10A1Q03692 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL10A1Q03692 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.92■□□□□ 0.46
COL10A1Q03692 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.92■□□□□ 0.46
COL10A1Q03692 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL10A1Q03692 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.92■□□□□ 0.46
COL10A1Q03692 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL10A1Q03692 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.92■□□□□ 0.46
COL10A1Q03692 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms