Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.7■□□□□ 0.26
CFHR3Q02985 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.7■□□□□ 0.26
CFHR3Q02985 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.7■□□□□ 0.26
CFHR3Q02985 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.7■□□□□ 0.26
CFHR3Q02985 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.7■□□□□ 0.26
CFHR3Q02985 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
CFHR3Q02985 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.69■□□□□ 0.26
CFHR3Q02985 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CFHR3Q02985 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CFHR3Q02985 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CFHR3Q02985 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.69■□□□□ 0.26
CFHR3Q02985 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.69■□□□□ 0.26
CFHR3Q02985 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.69■□□□□ 0.26
CFHR3Q02985 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.69■□□□□ 0.26
CFHR3Q02985 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CFHR3Q02985 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CFHR3Q02985 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.68■□□□□ 0.26
CFHR3Q02985 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFHR3Q02985 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.68■□□□□ 0.26
CFHR3Q02985 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.68■□□□□ 0.26
CFHR3Q02985 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.68■□□□□ 0.26
CFHR3Q02985 AC022517.1-201ENST00000592429 346 ntBASIC16.68■□□□□ 0.26
CFHR3Q02985 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFHR3Q02985 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFHR3Q02985 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFHR3Q02985 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CFHR3Q02985 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFHR3Q02985 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CFHR3Q02985 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.67■□□□□ 0.26
CFHR3Q02985 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.67■□□□□ 0.26
CFHR3Q02985 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CFHR3Q02985 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.67■□□□□ 0.26
CFHR3Q02985 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CFHR3Q02985 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.67■□□□□ 0.26
CFHR3Q02985 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
CFHR3Q02985 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFHR3Q02985 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.66■□□□□ 0.26
CFHR3Q02985 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CFHR3Q02985 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CFHR3Q02985 FAM99A-202ENST00000538190 1989 ntBASIC16.66■□□□□ 0.26
CFHR3Q02985 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFHR3Q02985 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFHR3Q02985 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.66■□□□□ 0.26
CFHR3Q02985 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFHR3Q02985 KRT19P1-201ENST00000405746 1186 ntBASIC16.66■□□□□ 0.26
CFHR3Q02985 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
CFHR3Q02985 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.66■□□□□ 0.26
CFHR3Q02985 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.66■□□□□ 0.26
CFHR3Q02985 EEF1DP3-203ENST00000566025 782 ntBASIC16.66■□□□□ 0.26
CFHR3Q02985 AC092666.2-201ENST00000613287 246 ntBASIC16.66■□□□□ 0.26
CFHR3Q02985 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFHR3Q02985 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFHR3Q02985 AC133561.1-201ENST00000568600 2415 ntBASIC16.66■□□□□ 0.26
CFHR3Q02985 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CFHR3Q02985 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFHR3Q02985 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CFHR3Q02985 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.65■□□□□ 0.26
CFHR3Q02985 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.65■□□□□ 0.26
CFHR3Q02985 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.65■□□□□ 0.26
CFHR3Q02985 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.65■□□□□ 0.26
CFHR3Q02985 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.65■□□□□ 0.26
CFHR3Q02985 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms