Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL1Q00532 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL1Q00532 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL1Q00532 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL1Q00532 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.95■□□□□ 0.95
CDKL1Q00532 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.95■□□□□ 0.94
CDKL1Q00532 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL1Q00532 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL1Q00532 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.95■□□□□ 0.94
CDKL1Q00532 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL1Q00532 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL1Q00532 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL1Q00532 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.95■□□□□ 0.94
CDKL1Q00532 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.95■□□□□ 0.94
CDKL1Q00532 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL1Q00532 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.95■□□□□ 0.94
CDKL1Q00532 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL1Q00532 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL1Q00532 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.95■□□□□ 0.94
CDKL1Q00532 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL1Q00532 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL1Q00532 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL1Q00532 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDKL1Q00532 AL121603.2-201ENST00000557373 2117 ntBASIC20.95■□□□□ 0.94
CDKL1Q00532 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
CDKL1Q00532 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL1Q00532 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL1Q00532 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.94■□□□□ 0.94
CDKL1Q00532 AL355001.2-201ENST00000620617 1191 ntBASIC20.94■□□□□ 0.94
CDKL1Q00532 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CDKL1Q00532 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CDKL1Q00532 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL1Q00532 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL1Q00532 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL1Q00532 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CDKL1Q00532 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL1Q00532 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.93■□□□□ 0.94
CDKL1Q00532 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.93■□□□□ 0.94
CDKL1Q00532 AC099791.1-201ENST00000416440 715 ntBASIC20.93■□□□□ 0.94
CDKL1Q00532 AP001330.3-201ENST00000520123 633 ntBASIC20.93■□□□□ 0.94
CDKL1Q00532 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.93■□□□□ 0.94
CDKL1Q00532 AC008764.7-201ENST00000593779 1081 ntBASIC20.93■□□□□ 0.94
CDKL1Q00532 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL1Q00532 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDKL1Q00532 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL1Q00532 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL1Q00532 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.92■□□□□ 0.94
CDKL1Q00532 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL1Q00532 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKL1Q00532 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL1Q00532 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKL1Q00532 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDKL1Q00532 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL1Q00532 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CDKL1Q00532 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL1Q00532 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL1Q00532 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL1Q00532 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL1Q00532 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKL1Q00532 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL1Q00532 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDKL1Q00532 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
CDKL1Q00532 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL1Q00532 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL1Q00532 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.91■□□□□ 0.94
CDKL1Q00532 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKL1Q00532 AP004607.7-201ENST00000527152 1677 ntBASIC20.91■□□□□ 0.94
CDKL1Q00532 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CDKL1Q00532 SMUG1P1-201ENST00000590640 811 ntBASIC20.91■□□□□ 0.94
CDKL1Q00532 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKL1Q00532 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL1Q00532 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL1Q00532 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKL1Q00532 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKL1Q00532 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.9■□□□□ 0.94
CDKL1Q00532 RASA4CP-201ENST00000424092 1398 ntBASIC20.9■□□□□ 0.94
CDKL1Q00532 MIR939-201ENST00000401314 82 ntBASIC20.9■□□□□ 0.94
CDKL1Q00532 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.9■□□□□ 0.94
CDKL1Q00532 AL031432.3-201ENST00000607698 485 ntBASIC20.9■□□□□ 0.94
CDKL1Q00532 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL1Q00532 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms