Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TERF1P2-201ENST00000583350 1212 ntBASIC19.09■□□□□ 0.65
H3F3AP84243 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
H3F3AP84243 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.09■□□□□ 0.65
H3F3AP84243 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
H3F3AP84243 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
H3F3AP84243 AC003102.1-202ENST00000563394 1796 ntBASIC19.09■□□□□ 0.65
H3F3AP84243 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
H3F3AP84243 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
H3F3AP84243 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
H3F3AP84243 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
H3F3AP84243 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
H3F3AP84243 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
H3F3AP84243 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H3F3AP84243 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
H3F3AP84243 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H3F3AP84243 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.08■□□□□ 0.64
H3F3AP84243 AC097381.1-201ENST00000429019 1296 ntBASIC19.08■□□□□ 0.64
H3F3AP84243 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.08■□□□□ 0.64
H3F3AP84243 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
H3F3AP84243 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.08■□□□□ 0.64
H3F3AP84243 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.08■□□□□ 0.64
H3F3AP84243 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.08■□□□□ 0.64
H3F3AP84243 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
H3F3AP84243 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
H3F3AP84243 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
H3F3AP84243 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.08■□□□□ 0.64
H3F3AP84243 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H3F3AP84243 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
H3F3AP84243 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
H3F3AP84243 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.08■□□□□ 0.64
H3F3AP84243 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
H3F3AP84243 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
H3F3AP84243 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
H3F3AP84243 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.07■□□□□ 0.64
H3F3AP84243 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.07■□□□□ 0.64
H3F3AP84243 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
H3F3AP84243 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.07■□□□□ 0.64
H3F3AP84243 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 MIR6821-201ENST00000617625 74 ntBASIC19.07■□□□□ 0.64
H3F3AP84243 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
H3F3AP84243 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
H3F3AP84243 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.06■□□□□ 0.64
H3F3AP84243 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.06■□□□□ 0.64
H3F3AP84243 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
H3F3AP84243 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.06■□□□□ 0.64
H3F3AP84243 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.06■□□□□ 0.64
H3F3AP84243 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.06■□□□□ 0.64
H3F3AP84243 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.06■□□□□ 0.64
H3F3AP84243 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.06■□□□□ 0.64
H3F3AP84243 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.06■□□□□ 0.64
H3F3AP84243 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
H3F3AP84243 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.06■□□□□ 0.64
H3F3AP84243 AC010542.4-201ENST00000563151 1910 ntBASIC19.06■□□□□ 0.64
H3F3AP84243 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H3F3AP84243 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
H3F3AP84243 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.05■□□□□ 0.64
H3F3AP84243 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.05■□□□□ 0.64
H3F3AP84243 LINC00565-201ENST00000562710 2331 ntBASIC19.05■□□□□ 0.64
H3F3AP84243 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
H3F3AP84243 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H3F3AP84243 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
H3F3AP84243 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.05■□□□□ 0.64
H3F3AP84243 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.05■□□□□ 0.64
H3F3AP84243 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.05■□□□□ 0.64
H3F3AP84243 CCDC92B-201ENST00000575506 885 ntBASIC19.05■□□□□ 0.64
H3F3AP84243 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.05■□□□□ 0.64
H3F3AP84243 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H3F3AP84243 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H3F3AP84243 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.05■□□□□ 0.64
H3F3AP84243 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
H3F3AP84243 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H3F3AP84243 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H3F3AP84243 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H3F3AP84243 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H3F3AP84243 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
H3F3AP84243 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.04■□□□□ 0.64
H3F3AP84243 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
H3F3AP84243 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
H3F3AP84243 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H3F3AP84243 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms