Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRB3P79483 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRB3P79483 FEM1AP4-201ENST00000443167 1987 ntBASIC17.8■□□□□ 0.44
HLA-DRB3P79483 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 AL138724.1-201ENST00000606771 1088 ntBASIC17.8■□□□□ 0.44
HLA-DRB3P79483 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRB3P79483 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 SYT6-210ENST00000641643 1587 ntBASIC17.79■□□□□ 0.44
HLA-DRB3P79483 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 SERBP1P1-201ENST00000396021 1160 ntBASIC17.79■□□□□ 0.44
HLA-DRB3P79483 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DRB3P79483 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 DUX4L19-201ENST00000557448 1267 ntBASIC17.78■□□□□ 0.44
HLA-DRB3P79483 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.78■□□□□ 0.44
HLA-DRB3P79483 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DRB3P79483 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 AL356441.2-201ENST00000443009 864 ntBASIC17.77■□□□□ 0.44
HLA-DRB3P79483 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRB3P79483 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
HLA-DRB3P79483 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DRB3P79483 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 AF106564.1-201ENST00000607058 2553 ntBASIC17.76■□□□□ 0.43
HLA-DRB3P79483 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 AC136469.2-201ENST00000623944 1028 ntBASIC17.76■□□□□ 0.43
HLA-DRB3P79483 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HLA-DRB3P79483 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.75■□□□□ 0.43
HLA-DRB3P79483 AC011298.3-201ENST00000615796 283 ntBASIC17.75■□□□□ 0.43
HLA-DRB3P79483 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms