Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H3AP68431 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIST1H3AP68431 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.67■□□□□ 0.58
HIST1H3AP68431 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H3AP68431 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H3AP68431 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H3AP68431 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H3AP68431 AC003102.1-202ENST00000563394 1796 ntBASIC18.67■□□□□ 0.58
HIST1H3AP68431 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H3AP68431 AC026310.3-201ENST00000625186 2373 ntBASIC18.67■□□□□ 0.58
HIST1H3AP68431 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H3AP68431 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H3AP68431 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H3AP68431 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H3AP68431 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H3AP68431 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HIST1H3AP68431 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H3AP68431 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H3AP68431 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.66■□□□□ 0.58
HIST1H3AP68431 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H3AP68431 AC105233.4-201ENST00000642045 216 ntBASIC18.66■□□□□ 0.58
HIST1H3AP68431 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H3AP68431 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H3AP68431 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H3AP68431 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.66■□□□□ 0.58
HIST1H3AP68431 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H3AP68431 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.65■□□□□ 0.58
HIST1H3AP68431 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HIST1H3AP68431 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H3AP68431 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HIST1H3AP68431 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H3AP68431 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H3AP68431 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H3AP68431 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST1H3AP68431 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H3AP68431 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.64■□□□□ 0.57
HIST1H3AP68431 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST1H3AP68431 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H3AP68431 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.64■□□□□ 0.57
HIST1H3AP68431 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HIST1H3AP68431 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HIST1H3AP68431 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H3AP68431 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H3AP68431 AC009237.3-201ENST00000393279 1427 ntBASIC18.64■□□□□ 0.57
HIST1H3AP68431 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
HIST1H3AP68431 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 Z98882.1-201ENST00000622160 2253 ntBASIC18.63■□□□□ 0.57
HIST1H3AP68431 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST1H3AP68431 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H3AP68431 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H3AP68431 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST1H3AP68431 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HIST1H3AP68431 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H3AP68431 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST1H3AP68431 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST1H3AP68431 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H3AP68431 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H3AP68431 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HIST1H3AP68431 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST1H3AP68431 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H3AP68431 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H3AP68431 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST1H3AP68431 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.61■□□□□ 0.57
HIST1H3AP68431 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H3AP68431 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H3AP68431 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H3AP68431 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H3AP68431 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H3AP68431 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H3AP68431 AC055733.4-201ENST00000638462 1354 ntBASIC18.61■□□□□ 0.57
HIST1H3AP68431 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H3AP68431 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms