Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.56■□□□□ 0.56
SEC61A1P61619 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.56■□□□□ 0.56
SEC61A1P61619 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SEC61A1P61619 AC144652.1-201ENST00000609974 1624 ntBASIC18.56■□□□□ 0.56
SEC61A1P61619 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A1P61619 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.55■□□□□ 0.56
SEC61A1P61619 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SEC61A1P61619 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.55■□□□□ 0.56
SEC61A1P61619 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.55■□□□□ 0.56
SEC61A1P61619 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.55■□□□□ 0.56
SEC61A1P61619 AC105265.2-201ENST00000467189 838 ntBASIC18.55■□□□□ 0.56
SEC61A1P61619 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.55■□□□□ 0.56
SEC61A1P61619 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SEC61A1P61619 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SEC61A1P61619 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.55■□□□□ 0.56
SEC61A1P61619 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A1P61619 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SEC61A1P61619 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SEC61A1P61619 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.54■□□□□ 0.56
SEC61A1P61619 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SEC61A1P61619 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.54■□□□□ 0.56
SEC61A1P61619 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.54■□□□□ 0.56
SEC61A1P61619 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SEC61A1P61619 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SEC61A1P61619 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SEC61A1P61619 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 AC005229.4-201ENST00000610085 2198 ntBASIC18.54■□□□□ 0.56
SEC61A1P61619 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.54■□□□□ 0.56
SEC61A1P61619 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A1P61619 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SEC61A1P61619 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SEC61A1P61619 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.53■□□□□ 0.56
SEC61A1P61619 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A1P61619 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A1P61619 AC099791.1-201ENST00000416440 715 ntBASIC18.53■□□□□ 0.56
SEC61A1P61619 AC091305.1-201ENST00000479476 895 ntBASIC18.53■□□□□ 0.56
SEC61A1P61619 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SEC61A1P61619 AC027682.1-201ENST00000562846 899 ntBASIC18.53■□□□□ 0.56
SEC61A1P61619 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.53■□□□□ 0.56
SEC61A1P61619 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SEC61A1P61619 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A1P61619 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A1P61619 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A1P61619 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.52■□□□□ 0.56
SEC61A1P61619 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SEC61A1P61619 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SEC61A1P61619 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SEC61A1P61619 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.52■□□□□ 0.56
SEC61A1P61619 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.52■□□□□ 0.56
SEC61A1P61619 CA15P2-201ENST00000611168 834 ntBASIC18.52■□□□□ 0.56
SEC61A1P61619 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SEC61A1P61619 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SEC61A1P61619 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A1P61619 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SEC61A1P61619 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SEC61A1P61619 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.52■□□□□ 0.55
SEC61A1P61619 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SEC61A1P61619 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.52■□□□□ 0.55
SEC61A1P61619 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SEC61A1P61619 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SEC61A1P61619 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SEC61A1P61619 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.52■□□□□ 0.55
SEC61A1P61619 LINC01529-204ENST00000636474 1715 ntBASIC18.52■□□□□ 0.55
SEC61A1P61619 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms