Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 YOR379CYOR379C 339 nt5.26□□□□□ -1.57
UFD2P54860 PBN1YCL052C 1251 nt5.26□□□□□ -1.57
UFD2P54860 ECM32YER176W 3366 nt5.26□□□□□ -1.57
UFD2P54860 CDC9YDL164C 2268 nt5.26□□□□□ -1.57
UFD2P54860 ADE6YGR061C 4077 nt5.25□□□□□ -1.57
UFD2P54860 CTR86YCR054C 1692 nt5.25□□□□□ -1.57
UFD2P54860 YHR182WYHR182W 2358 nt5.25□□□□□ -1.57
UFD2P54860 CLB3YDL155W 1284 nt5.25□□□□□ -1.57
UFD2P54860 MET32YDR253C 576 nt5.25□□□□□ -1.57
UFD2P54860 RPL16AYIL133C 600 nt5.25□□□□□ -1.57
UFD2P54860 YMR052C-AYMR052C-A 366 nt5.25□□□□□ -1.57
UFD2P54860 TOM22YNL131W 459 nt5.25□□□□□ -1.57
UFD2P54860 ATG3YNR007C 933 nt5.25□□□□□ -1.57
UFD2P54860 YOL150CYOL150C 312 nt5.25□□□□□ -1.57
UFD2P54860 YOL159C-AYOL159C-A 273 nt5.25□□□□□ -1.57
UFD2P54860 RGS2YOR107W 930 nt5.25□□□□□ -1.57
UFD2P54860 snR17bsnR17b 332 nt5.25□□□□□ -1.57
UFD2P54860 YBR103C-AYBR103C-A 144 nt5.25□□□□□ -1.57
UFD2P54860 ERG11YHR007C 1593 nt5.25□□□□□ -1.57
UFD2P54860 SMP3YOR149C 1551 nt5.25□□□□□ -1.57
UFD2P54860 ALG6YOR002W 1635 nt5.24□□□□□ -1.57
UFD2P54860 MSM1YGR171C 1728 nt5.24□□□□□ -1.57
UFD2P54860 YHL048C-AYHL048C-A 135 nt5.24□□□□□ -1.57
UFD2P54860 YIL024CYIL024C 570 nt5.24□□□□□ -1.57
UFD2P54860 ATG10YLL042C 504 nt5.24□□□□□ -1.57
UFD2P54860 SWS2YNL081C 432 nt5.24□□□□□ -1.57
UFD2P54860 UBP10YNL186W 2379 nt5.24□□□□□ -1.57
UFD2P54860 HCM1YCR065W 1695 nt5.24□□□□□ -1.57
UFD2P54860 TRM11YOL124C 1302 nt5.23□□□□□ -1.57
UFD2P54860 YJL206CYJL206C 2277 nt5.23□□□□□ -1.57
UFD2P54860 YCR013CYCR013C 648 nt5.23□□□□□ -1.57
UFD2P54860 MGT1YDL200C 567 nt5.23□□□□□ -1.57
UFD2P54860 BSC2YDR275W 708 nt5.23□□□□□ -1.57
UFD2P54860 YAE1YJR067C 426 nt5.23□□□□□ -1.57
UFD2P54860 YOR029WYOR029W 336 nt5.23□□□□□ -1.57
UFD2P54860 YJL049WYJL049W 1353 nt5.23□□□□□ -1.57
UFD2P54860 GAD1YMR250W 1758 nt5.23□□□□□ -1.57
UFD2P54860 AFR1YDR085C 1863 nt5.23□□□□□ -1.57
UFD2P54860 TRE1YPL176C 2352 nt5.23□□□□□ -1.57
UFD2P54860 SAP4YGL229C 2457 nt5.23□□□□□ -1.57
UFD2P54860 CPS1YJL172W 1731 nt5.23□□□□□ -1.57
UFD2P54860 SNF3YDL194W 2655 nt5.22□□□□□ -1.57
UFD2P54860 KCC4YCL024W 3114 nt5.22□□□□□ -1.57
UFD2P54860 PRS5YOL061W 1491 nt5.22□□□□□ -1.57
UFD2P54860 URC2YDR520C 2319 nt5.22□□□□□ -1.57
UFD2P54860 SLY41YOR307C 1362 nt5.22□□□□□ -1.57
UFD2P54860 YPD1YDL235C 504 nt5.22□□□□□ -1.57
UFD2P54860 ECM11YDR446W 909 nt5.22□□□□□ -1.57
UFD2P54860 TFB3YDR460W 966 nt5.22□□□□□ -1.57
UFD2P54860 COX13YGL191W 390 nt5.22□□□□□ -1.57
UFD2P54860 SOP4YJL192C 705 nt5.22□□□□□ -1.57
UFD2P54860 REE1YJL217W 597 nt5.22□□□□□ -1.57
UFD2P54860 UBI4YLL039C 1146 nt5.22□□□□□ -1.57
UFD2P54860 YLR290CYLR290C 834 nt5.22□□□□□ -1.57
UFD2P54860 YML003WYML003W 873 nt5.22□□□□□ -1.57
UFD2P54860 PHO80YOL001W 882 nt5.22□□□□□ -1.57
UFD2P54860 GCY1YOR120W 939 nt5.22□□□□□ -1.57
UFD2P54860 MON1YGL124C 1935 nt5.22□□□□□ -1.57
UFD2P54860 TPD3YAL016W 1908 nt5.22□□□□□ -1.57
UFD2P54860 SKG3YLR187W 3081 nt5.22□□□□□ -1.57
UFD2P54860 UGA3YDL170W 1587 nt5.21□□□□□ -1.57
UFD2P54860 SDS23YGL056C 1584 nt5.21□□□□□ -1.57
UFD2P54860 STE20YHL007C 2820 nt5.21□□□□□ -1.57
UFD2P54860 DSL1YNL258C 2265 nt5.21□□□□□ -1.58
UFD2P54860 YTA6YPL074W 2265 nt5.21□□□□□ -1.58
UFD2P54860 SNA2YDR525W-A 240 nt5.21□□□□□ -1.58
UFD2P54860 VMA8YEL051W 771 nt5.21□□□□□ -1.58
UFD2P54860 PUG1YER185W 912 nt5.21□□□□□ -1.58
UFD2P54860 YLR171WYLR171W 390 nt5.21□□□□□ -1.58
UFD2P54860 BUR2YLR226W 1188 nt5.21□□□□□ -1.58
UFD2P54860 YNL057WYNL057W 333 nt5.21□□□□□ -1.58
UFD2P54860 YPL034WYPL034W 498 nt5.21□□□□□ -1.58
UFD2P54860 YPL109CYPL109C 1974 nt5.21□□□□□ -1.58
UFD2P54860 MBP1YDL056W 2502 nt5.21□□□□□ -1.58
UFD2P54860 DBP3YGL078C 1572 nt5.21□□□□□ -1.58
UFD2P54860 TAF5YBR198C 2397 nt5.2□□□□□ -1.58
UFD2P54860 CWC2YDL209C 1020 nt5.2□□□□□ -1.58
UFD2P54860 VAB2YEL005C 849 nt5.2□□□□□ -1.58
UFD2P54860 IES5YER092W 378 nt5.2□□□□□ -1.58
UFD2P54860 tS(AGA)D3tS(AGA)D3 83 nt5.2□□□□□ -1.58
UFD2P54860 COX2Q0250 756 nt5.2□□□□□ -1.58
UFD2P54860 SDL1YIL167W 633 nt5.2□□□□□ -1.58
UFD2P54860 ASG7YJL170C 630 nt5.2□□□□□ -1.58
UFD2P54860 YKL065W-AYKL065W-A 222 nt5.2□□□□□ -1.58
UFD2P54860 RPS19AYOL121C 435 nt5.2□□□□□ -1.58
UFD2P54860 KIN3YAR018C 1308 nt5.2□□□□□ -1.58
UFD2P54860 ARP5YNL059C 2268 nt5.2□□□□□ -1.58
UFD2P54860 NEL1YHR035W 1893 nt5.2□□□□□ -1.58
UFD2P54860 UBA2YDR390C 1911 nt5.19□□□□□ -1.58
UFD2P54860 CAF4YKR036C 1932 nt5.19□□□□□ -1.58
UFD2P54860 VPS33YLR396C 2076 nt5.19□□□□□ -1.58
UFD2P54860 PHO87YCR037C 2772 nt5.19□□□□□ -1.58
UFD2P54860 ARG82YDR173C 1068 nt5.19□□□□□ -1.58
UFD2P54860 YDR274CYDR274C 372 nt5.19□□□□□ -1.58
UFD2P54860 LSB1YGR136W 726 nt5.19□□□□□ -1.58
UFD2P54860 YHR130CYHR130C 336 nt5.19□□□□□ -1.58
UFD2P54860 YHR182C-AYHR182C-A 474 nt5.19□□□□□ -1.58
UFD2P54860 YET1YKL065C 621 nt5.19□□□□□ -1.58
UFD2P54860 YAR047CYAR047C 321 nt5.19□□□□□ -1.58
UFD2P54860 YLR364C-AYLR364C-A 123 nt5.19□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms