Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 ARI1YGL157W 1044 nt3.62□□□□□ -1.83
RPT4P53549 IRC9YJL142C 393 nt3.62□□□□□ -1.83
RPT4P53549 PRE8YML092C 753 nt3.62□□□□□ -1.83
RPT4P53549 RPS12YOR369C 432 nt3.62□□□□□ -1.83
RPT4P53549 PBP2YBR233W 1242 nt3.62□□□□□ -1.83
RPT4P53549 ARO4YBR249C 1113 nt3.62□□□□□ -1.83
RPT4P53549 NTH1YDR001C 2256 nt3.61□□□□□ -1.83
RPT4P53549 ISM1YPL040C 3009 nt3.61□□□□□ -1.83
RPT4P53549 ERB1YMR049C 2424 nt3.61□□□□□ -1.83
RPT4P53549 TRP4YDR354W 1143 nt3.61□□□□□ -1.83
RPT4P53549 GEP4YHR100C 558 nt3.61□□□□□ -1.83
RPT4P53549 POG1YIL122W 1056 nt3.61□□□□□ -1.83
RPT4P53549 YAR075WYAR075W 474 nt3.61□□□□□ -1.83
RPT4P53549 RIF2YLR453C 1188 nt3.61□□□□□ -1.83
RPT4P53549 SYC1YOR179C 567 nt3.61□□□□□ -1.83
RPT4P53549 MRP2YPR166C 348 nt3.61□□□□□ -1.83
RPT4P53549 MIC60YKR016W 1623 nt3.61□□□□□ -1.83
RPT4P53549 DBP10YDL031W 2988 nt3.61□□□□□ -1.83
RPT4P53549 PCI8YIL071C 1335 nt3.61□□□□□ -1.83
RPT4P53549 AUS1YOR011W 4185 nt3.6□□□□□ -1.83
RPT4P53549 YER138W-AYER138W-A 105 nt3.6□□□□□ -1.83
RPT4P53549 ARG3YJL088W 1017 nt3.6□□□□□ -1.83
RPT4P53549 MTG1YMR097C 1104 nt3.6□□□□□ -1.83
RPT4P53549 MRPS8YMR158W 468 nt3.6□□□□□ -1.83
RPT4P53549 ATG19YOL082W 1248 nt3.6□□□□□ -1.83
RPT4P53549 YBL107W-AYBL107W-A 105 nt3.6□□□□□ -1.83
RPT4P53549 MRPL27YBR282W 441 nt3.6□□□□□ -1.83
RPT4P53549 RGC1YPR115W 3252 nt3.6□□□□□ -1.83
RPT4P53549 FMP25YLR077W 1752 nt3.59□□□□□ -1.83
RPT4P53549 GPI1YGR216C 1830 nt3.59□□□□□ -1.83
RPT4P53549 RPL23BYER117W 414 nt3.59□□□□□ -1.83
RPT4P53549 SPT15YER148W 723 nt3.59□□□□□ -1.83
RPT4P53549 ARC19YKL013C 516 nt3.59□□□□□ -1.83
RPT4P53549 PIR1YKL164C 1026 nt3.59□□□□□ -1.83
RPT4P53549 snR17asnR17a 333 nt3.59□□□□□ -1.83
RPT4P53549 SWI1YPL016W 3945 nt3.59□□□□□ -1.83
RPT4P53549 PHO5YBR093C 1404 nt3.59□□□□□ -1.84
RPT4P53549 CAF130YGR134W 3369 nt3.59□□□□□ -1.84
RPT4P53549 FLO10YKR102W 3510 nt3.58□□□□□ -1.84
RPT4P53549 ABP140YOR239W 1887 nt3.58□□□□□ -1.84
RPT4P53549 YKL222CYKL222C 2118 nt3.58□□□□□ -1.84
RPT4P53549 PRP18YGR006W 756 nt3.58□□□□□ -1.84
RPT4P53549 DOG2YHR043C 741 nt3.58□□□□□ -1.84
RPT4P53549 YIR023C-AYIR023C-A 324 nt3.58□□□□□ -1.84
RPT4P53549 MRPL49YJL096W 486 nt3.58□□□□□ -1.84
RPT4P53549 ANB1YJR047C 474 nt3.58□□□□□ -1.84
RPT4P53549 YMR310CYMR310C 954 nt3.58□□□□□ -1.84
RPT4P53549 DUG3YNL191W 1074 nt3.58□□□□□ -1.84
RPT4P53549 RPC34YNR003C 954 nt3.58□□□□□ -1.84
RPT4P53549 TRM112YNR046W 408 nt3.58□□□□□ -1.84
RPT4P53549 YOR331CYOR331C 558 nt3.58□□□□□ -1.84
RPT4P53549 CSH1YBR161W 1131 nt3.58□□□□□ -1.84
RPT4P53549 KAR1YNL188W 1302 nt3.58□□□□□ -1.84
RPT4P53549 BCS1YDR375C 1371 nt3.58□□□□□ -1.84
RPT4P53549 TEC1YBR083W 1461 nt3.58□□□□□ -1.84
RPT4P53549 SPT16YGL207W 3108 nt3.58□□□□□ -1.84
RPT4P53549 FLO5YHR211W 3228 nt3.58□□□□□ -1.84
RPT4P53549 YPS6YIR039C 1614 nt3.58□□□□□ -1.84
RPT4P53549 SEC6YIL068C 2418 nt3.58□□□□□ -1.84
RPT4P53549 TSC13YDL015C 933 nt3.57□□□□□ -1.84
RPT4P53549 PDS1YDR113C 1122 nt3.57□□□□□ -1.84
RPT4P53549 TLG1YDR468C 675 nt3.57□□□□□ -1.84
RPT4P53549 YGL006W-AYGL006W-A 111 nt3.57□□□□□ -1.84
RPT4P53549 RPL30YGL030W 318 nt3.57□□□□□ -1.84
RPT4P53549 AML1YGR001C 747 nt3.57□□□□□ -1.84
RPT4P53549 SUP45YBR143C 1314 nt3.57□□□□□ -1.84
RPT4P53549 MRPS9YBR146W 837 nt3.57□□□□□ -1.84
RPT4P53549 SPA2YLL021W 4401 nt3.56□□□□□ -1.84
RPT4P53549 YJR061WYJR061W 2808 nt3.56□□□□□ -1.84
RPT4P53549 PHM6YDR281C 315 nt3.56□□□□□ -1.84
RPT4P53549 THP2YHR167W 786 nt3.56□□□□□ -1.84
RPT4P53549 DCG1YIR030C 735 nt3.56□□□□□ -1.84
RPT4P53549 YJR111CYJR111C 852 nt3.56□□□□□ -1.84
RPT4P53549 YLR163W-AYLR163W-A 114 nt3.56□□□□□ -1.84
RPT4P53549 YIP3YNL044W 531 nt3.56□□□□□ -1.84
RPT4P53549 YOL038C-AYOL038C-A 96 nt3.56□□□□□ -1.84
RPT4P53549 HNT3YOR258W 654 nt3.56□□□□□ -1.84
RPT4P53549 YBR089WYBR089W 600 nt3.56□□□□□ -1.84
RPT4P53549 CPA2YJR109C 3357 nt3.56□□□□□ -1.84
RPT4P53549 ENA2YDR039C 3276 nt3.56□□□□□ -1.84
RPT4P53549 ENA1YDR040C 3276 nt3.56□□□□□ -1.84
RPT4P53549 VTC4YJL012C 2166 nt3.56□□□□□ -1.84
RPT4P53549 ROG1YGL144C 2058 nt3.56□□□□□ -1.84
RPT4P53549 PBI1YPL272C 1554 nt3.55□□□□□ -1.84
RPT4P53549 TLC1TLC1 1301 nt3.55□□□□□ -1.84
RPT4P53549 RTT109YLL002W 1311 nt3.55□□□□□ -1.84
RPT4P53549 CHO2YGR157W 2610 nt3.55□□□□□ -1.84
RPT4P53549 RPS29BYDL061C 171 nt3.55□□□□□ -1.84
RPT4P53549 BUD26YDR241W 288 nt3.55□□□□□ -1.84
RPT4P53549 ALB1YJL122W 528 nt3.55□□□□□ -1.84
RPT4P53549 HYM1YKL189W 1200 nt3.55□□□□□ -1.84
RPT4P53549 PNO1YOR145C 825 nt3.55□□□□□ -1.84
RPT4P53549 DIB1YPR082C 432 nt3.55□□□□□ -1.84
RPT4P53549 RIB5YBR256C 717 nt3.55□□□□□ -1.84
RPT4P53549 BCH1YMR237W 2175 nt3.55□□□□□ -1.84
RPT4P53549 SLM2YNL047C 1971 nt3.54□□□□□ -1.84
RPT4P53549 FAP7YDL166C 594 nt3.54□□□□□ -1.84
RPT4P53549 YFR032C-BYFR032C-B 264 nt3.54□□□□□ -1.84
RPT4P53549 PFS1YHR185C 714 nt3.54□□□□□ -1.84
RPT4P53549 RSM26YJR101W 801 nt3.54□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 48.9 ms